RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 FMO5P49326 533 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 CDH8P55286 799 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 SMARCB1Q12824 385 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 DUSP4Q13115 394 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 KLHL40Q2TBA0 621 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 UBALD2Q8IYN6 164 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 DCP1BQ8IZD4 617 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 SPPL2BQ8TCT7 592 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 C2orf15Q8WU43 125 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 PBXIP1Q96AQ6 731 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 CNOT6LQ96LI5 555 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 BCO2Q9BYV7 579 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 IMPG2Q9BZV3 1241 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 RAB20Q9NX57 234 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 CDH9Q9ULB4 789 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 DOCK6Q96HP0 2047 aa16.57■□□□□ 0.24
RABGGTA-219ENST00000560871 TRIOO75962 3097 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 MYBPHLA2RUH7 354 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 N4BP1O75113 896 aaKnown RBP16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 XYLBO75191 536 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 LRG1P02750 347 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 ASGR2P07307 311 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 P4HA1P13674 534 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 PLA2G5P39877 138 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 PSMC1P62191 440 aaKnown RBP16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 TWF1Q12792 350 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 MTMR3Q13615 1198 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 NFE2Q16621 373 aaPredicted RBP16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 CAVIN1Q6NZI2 390 aaKnown RBP16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 FAM171BQ6P995 826 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 C11orf57Q6ZUT1 292 aaPredicted RBP16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 GRASPQ7Z6J2 395 aaPredicted RBP16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 NIF3L1Q9GZT8 377 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 DNAJC25Q9H1X3 360 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 DPEP3Q9H4B8 488 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 PIDD1Q9HB75 910 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 CRTAC1Q9NQ79 661 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 GTF3C4Q9UKN8 822 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 DOCK8Q8NF50 2099 aa16.56■□□□□ 0.24
RABGGTA-219ENST00000560871 ATP2C2O75185 946 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 CLSTN1O94985 981 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 CCDC192P0DO97 292 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 ATF6P18850 670 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 NTHL1P78549 312 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 INCA1Q0VD86 236 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 STX1AQ16623 288 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 SASS6Q6UVJ0 657 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 OR6B3Q8NGW1 331 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 MYLPFQ96A32 169 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 FAXDC2Q96IV6 333 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 KCNH6Q9H252 994 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 SNX25Q9H3E2 840 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 THAP9Q9H5L6 903 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 HCFC1R1Q9NWW0 138 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 ABI2Q9NYB9 513 aaPredicted RBP16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 CEP72Q9P209 647 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 DNMT3BQ9UBC3 853 aaKnown RBP16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 SLC27A5Q9Y2P5 690 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 PCDHB5Q9Y5E4 795 aa16.55■□□□□ 0.24
RABGGTA-219ENST00000560871 NOTCH4Q99466 2003 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 P4HA2O15460 535 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 SOAT2O75908 522 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 AFPP02771 609 aaKnown RBP16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 PDGFRBP09619 1106 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 HAPLN1P10915 354 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 PTMSP20962 102 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 GNL1P36915 607 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 CDR1P51861 262 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 KCNH2Q12809 1159 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 PLD1Q13393 1074 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 MGAT5BQ3V5L5 792 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 CFAP221Q4G0U5 840 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 FBXL6Q8N531 539 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 CCDC150Q8NCX0 1101 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 ENOX1Q8TC92 643 aaKnown RBP16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 FAM122AQ96E09 287 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 FUBP3Q96I24 572 aaKnown RBP eCLIP16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 MYADMQ96S97 322 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 SMOC2Q9H3U7 446 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 ABCB6Q9NP58 842 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 AVENQ9NQS1 362 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 ANO10Q9NW15 660 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 HMGXB4Q9UGU5 601 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 ZNF318Q5VUA4 2279 aa16.54■□□□□ 0.24
RABGGTA-219ENST00000560871 A8MXQ7 604 aa16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 GBP2P32456 591 aaPredicted RBP16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 EPHA5P54756 1037 aa16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 TYRO3Q06418 890 aa16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 GET4Q7L5D6 327 aaPredicted RBP16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 TMC8Q8IU68 726 aa16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 B3GALNT2Q8NCR0 500 aa16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 LMO3Q8TAP4 145 aa16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 MYCBPAPQ8TBZ2 947 aa16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 PCED1BQ96HM7 432 aa16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 SEPT5Q99719 369 aaPredicted RBP16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 LRRC3Q9BY71 257 aa16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 KCNK12Q9HB15 430 aa16.53■□□□□ 0.24
RABGGTA-219ENST00000560871 CYP3A43Q9HB55 503 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms