RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 SEPSECSQ9HD40 501 aaKnown RBP5.4□□□□□ -1.54
PABPN1-204ENST00000554062 KIF17Q9P2E2 1029 aa5.4□□□□□ -1.54
PABPN1-204ENST00000554062 FBXO2Q9UK22 296 aaPredicted RBP5.4□□□□□ -1.54
PABPN1-204ENST00000554062 NFU1Q9UMS0 254 aa5.4□□□□□ -1.54
PABPN1-204ENST00000554062 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.4□□□□□ -1.54
PABPN1-204ENST00000554062 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.4□□□□□ -1.54
PABPN1-204ENST00000554062 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 E7ENX8 843 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 J3KRW8 73 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 RAB27BO00194 218 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 EIF3FO00303 357 aaPredicted RBP5.39□□□□□ -1.55
PABPN1-204ENST00000554062 TRIM38O00635 465 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 CCNT2O60583 730 aaKnown RBP5.39□□□□□ -1.55
PABPN1-204ENST00000554062 CDC14BO60729 498 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 NDST3O95803 873 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 CST5P28325 142 aaPredicted RBP5.39□□□□□ -1.55
PABPN1-204ENST00000554062 ALDH18A1P54886 795 aaKnown RBP5.39□□□□□ -1.55
PABPN1-204ENST00000554062 VAMP2P63027 116 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 TAP2Q03519 686 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 KRT17Q04695 432 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 TLE2Q04725 743 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 PLA1AQ53H76 456 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 NRSN1Q8IZ57 195 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 ANKRD35Q8N283 1001 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 CLASRPQ8N2M8 674 aaKnown RBP5.39□□□□□ -1.55
PABPN1-204ENST00000554062 TMIEQ8NEW7 156 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 ST8SIA2Q92186 375 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 DACT3Q96B18 629 aaPredicted RBP5.39□□□□□ -1.55
PABPN1-204ENST00000554062 C18orf8Q96DM3 657 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 KLHL32Q96NJ5 620 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 LMF1Q96S06 567 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 PNKPQ96T60 521 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 SEC62Q99442 399 aaKnown RBP5.39□□□□□ -1.55
PABPN1-204ENST00000554062 MESP1Q9BRJ9 268 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 SORBS1Q9BX66 1292 aaKnown RBP5.39□□□□□ -1.55
PABPN1-204ENST00000554062 SPON1Q9HCB6 807 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 FBXO34Q9NWN3 711 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 POGKQ9P215 609 aa5.39□□□□□ -1.55
PABPN1-204ENST00000554062 MTO1Q9Y2Z2 717 aaKnown RBP5.39□□□□□ -1.55
PABPN1-204ENST00000554062 DIRC3C9JPN6 131 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 POLRMTO00411 1230 aaKnown RBP5.38□□□□□ -1.55
PABPN1-204ENST00000554062 FFAR3O14843 346 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 PIP5K1BO14986 540 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 FARP2O94887 1054 aaPredicted RBP5.38□□□□□ -1.55
PABPN1-204ENST00000554062 TSPAN15O95858 294 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 AGR2O95994 175 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 HLA-DOAP06340 250 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 SRGNP10124 158 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 CKBP12277 381 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 RRAGBQ5VZM2 374 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 PLAG1Q6DJT9 500 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 ATG14Q6ZNE5 492 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 LRRTM4Q86VH4 590 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 CCDC117Q8IWD4 279 aaPredicted RBP5.38□□□□□ -1.55
PABPN1-204ENST00000554062 Q8N3U1 123 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 PDPRQ8NCN5 879 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 STT3BQ8TCJ2 826 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 OTUD7AQ8TE49 926 aaPredicted RBP5.38□□□□□ -1.55
PABPN1-204ENST00000554062 RAPGEF4Q8WZA2 1011 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 PCDHAC1Q9H158 963 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 TP63Q9H3D4 680 aaPredicted RBP5.38□□□□□ -1.55
PABPN1-204ENST00000554062 RNPEPQ9H4A4 650 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 WASH6PQ9NQA3 447 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 GJB4Q9NTQ9 266 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 ITIH6Q6UXX5 1313 aa5.38□□□□□ -1.55
PABPN1-204ENST00000554062 CCDC195A0A1B0GUA6 201 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 AQP12BA6NM10 295 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 WNT10BO00744 389 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 ASNA1O43681 348 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 B4GALT4O60513 344 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 PIAS2O75928 621 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 KIF20AO95235 890 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 VIPP01282 170 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 ITGB1P05556 798 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 SPATA31D3P0C874 917 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 ITGALP20701 1170 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 FDXRP22570 491 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 GCSHP23434 173 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 KRT9P35527 623 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 PTDSS1P48651 473 aaKnown RBP5.37□□□□□ -1.55
PABPN1-204ENST00000554062 PXNP49023 591 aaPredicted RBP5.37□□□□□ -1.55
PABPN1-204ENST00000554062 EPHB4P54760 987 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 HHEXQ03014 270 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 GRM7Q14831 915 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 FAM214AQ32MH5 1076 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 L1TD1Q5T7N2 865 aaKnown RBP5.37□□□□□ -1.55
PABPN1-204ENST00000554062 TCERG1LQ5VWI1 586 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 SLFN13Q68D06 897 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 TTLL5Q6EMB2 1281 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 SFRP4Q6FHJ7 346 aaPredicted RBP5.37□□□□□ -1.55
PABPN1-204ENST00000554062 FAAH2Q6GMR7 532 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 TAPT1Q6NXT6 567 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 JMJD6Q6NYC1 403 aaPredicted RBP5.37□□□□□ -1.55
PABPN1-204ENST00000554062 CRTC1Q6UUV9 634 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 KIAA0408Q6ZU52 694 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 SPATA31D4Q6ZUB0 917 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 RAB11FIP2Q7L804 512 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 MAATS1Q7Z4T9 603 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 CCDC28AQ8IWP9 274 aa5.37□□□□□ -1.55
PABPN1-204ENST00000554062 SP8Q8IXZ3 490 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms