RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 AFF1P51825 1210 aaKnown RBP11.54□□□□□ -0.56
PABPN1-203ENST00000553960 LRRC38Q5VT99 294 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 RNF168Q8IYW5 571 aaPredicted RBP11.54□□□□□ -0.56
PABPN1-203ENST00000553960 ADGRF2Q8IZF7 708 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 TMEM199Q8N511 208 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 C3orf58Q8NDZ4 430 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 DIS3LQ8TF46 1054 aaKnown RBP11.54□□□□□ -0.56
PABPN1-203ENST00000553960 CD101Q93033 1021 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 LPPQ93052 612 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 TOP1MTQ969P6 601 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 MMS19Q96T76 1030 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 MRPL45Q9BRJ2 306 aaKnown RBP11.54□□□□□ -0.56
PABPN1-203ENST00000553960 THAP2Q9H0W7 228 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 CSNK1G1Q9HCP0 422 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 ACP6Q9NPH0 428 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 ADAM22Q9P0K1 906 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 TRIM10Q9UDY6 481 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 SNX12Q9UMY4 172 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 NME7Q9Y5B8 376 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 PTPRDP23468 1912 aa11.54□□□□□ -0.56
PABPN1-203ENST00000553960 TMEM191CA6NGB0 347 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 CTIFO43310 598 aaKnown RBP11.53□□□□□ -0.56
PABPN1-203ENST00000553960 ERBB2P04626 1255 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 GLI1P08151 1106 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 CD58P19256 250 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 PLA2G4AP47712 749 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 BCAT1P54687 386 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 MAMLD1Q13495 774 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 TIGD5Q53EQ6 642 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 BEND5Q7L4P6 421 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 NT5DC3Q86UY8 548 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 LRRC43Q8N309 656 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 B3GALNT2Q8NCR0 500 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 MYCBPAPQ8TBZ2 947 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 FUBP3Q96I24 572 aaKnown RBP eCLIP11.53□□□□□ -0.56
PABPN1-203ENST00000553960 CARD9Q9H257 536 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 SNX25Q9H3E2 840 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 ASNSD1Q9NWL6 643 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 HSFX1Q9UBD0 423 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 SAR1BQ9Y6B6 198 aa11.53□□□□□ -0.56
PABPN1-203ENST00000553960 MACROD2A1Z1Q3 448 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 TRIM43BA6NCK2 446 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 A8MXQ7 604 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 XPO1O14980 1071 aaKnown RBP11.52□□□□□ -0.57
PABPN1-203ENST00000553960 TBC1D4O60343 1298 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 B3GAT3O94766 335 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 DDHD2O94830 711 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 MICAL2O94851 1124 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 C1RP00736 705 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 ALDH2P05091 517 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 FGFR1P11362 822 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 PTPN1P18031 435 aaKnown RBP11.52□□□□□ -0.57
PABPN1-203ENST00000553960 FGFR3P22607 806 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 BRD2P25440 801 aaKnown RBP11.52□□□□□ -0.57
PABPN1-203ENST00000553960 CTNNA2P26232 953 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 CYP2C18P33260 490 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 ATN1P54259 1190 aaPredicted RBP11.52□□□□□ -0.57
PABPN1-203ENST00000553960 BST2Q10589 180 aaKnown RBP11.52□□□□□ -0.57
PABPN1-203ENST00000553960 PDCLQ13371 301 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 DNTTIP2Q5QJE6 756 aaKnown RBP11.52□□□□□ -0.57
PABPN1-203ENST00000553960 TAF3Q5VWG9 929 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 NAA35Q5VZE5 725 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 WSCD1Q658N2 575 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 ERICH1Q86X53 443 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 VSIG1Q86XK7 387 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 CMTR2Q8IYT2 770 aaKnown RBP11.52□□□□□ -0.57
PABPN1-203ENST00000553960 RASGEF1CQ8N431 466 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 MYRIPQ8NFW9 859 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 TRIM43Q96BQ3 446 aaPredicted RBP11.52□□□□□ -0.57
PABPN1-203ENST00000553960 C18orf8Q96DM3 657 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 ARHGEF26Q96DR7 871 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 PBKQ96KB5 322 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 HEXIM2Q96MH2 286 aaKnown RBP11.52□□□□□ -0.57
PABPN1-203ENST00000553960 COLEC11Q9BWP8 271 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 DUSP16Q9BY84 665 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 MCOLN1Q9GZU1 580 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 GOLGA2P5Q9HBQ8 144 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 IL23AQ9NPF7 189 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 HESX1Q9UBX0 185 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 CNOT8Q9UFF9 292 aaKnown RBP11.52□□□□□ -0.57
PABPN1-203ENST00000553960 HMGXB4Q9UGU5 601 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 TSPAN16Q9UKR8 245 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 MAFFQ9ULX9 164 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 COG5Q9UP83 839 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 HYOU1Q9Y4L1 999 aa11.52□□□□□ -0.57
PABPN1-203ENST00000553960 ALPK3Q96L96 1907 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 CCDC66A2RUB6 948 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 BUB1BO60566 1050 aaPredicted RBP11.51□□□□□ -0.57
PABPN1-203ENST00000553960 PALMO75781 387 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 PROSCO94903 275 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 MOCS3O95396 460 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 CFHP08603 1231 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 RAP1GAPP47736 663 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 HTRA4P83105 476 aaPredicted RBP11.51□□□□□ -0.57
PABPN1-203ENST00000553960 PPIGQ13427 754 aaKnown RBP eCLIP11.51□□□□□ -0.578e-13■■■□□ 17.5
PABPN1-203ENST00000553960 PIGHQ14442 188 aaPredicted RBP11.51□□□□□ -0.57
PABPN1-203ENST00000553960 TCTN1Q2MV58 587 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 CFAP221Q4G0U5 840 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 PTPN20Q4JDL3 420 aa11.51□□□□□ -0.57
PABPN1-203ENST00000553960 RAB41Q5JT25 222 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms