RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 PARP9Q8IXQ6 854 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 PDCL2Q8N4E4 241 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 TMEM199Q8N511 208 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 TOP6BLQ8N6T0 577 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 URGCPQ8TCY9 931 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 HASPINQ8TF76 798 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 SENP8Q96LD8 212 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 SPSB2Q99619 263 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 FAM124BQ9H5Z6 455 aaPredicted RBP8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 NRDE2Q9H7Z3 1164 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 IL23AQ9NPF7 189 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 LRFN2Q9ULH4 789 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 BARX2Q9UMQ3 279 aaPredicted RBP8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 ATP8B3O60423 1300 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 ABHD14A-ACY1A0A1B0GW23 586 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 TBKBP1A7MCY6 615 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 TMCO5BA8MYB1 307 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 RNF223E7ERA6 249 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 TMEM189-UBE2V1I3L0A0 370 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 I3L4J1 428 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 CYB561D2O14569 222 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 GABRDO14764 452 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 FANCGO15287 622 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 CCP110O43303 1012 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 TACC1O75410 805 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 B3GAT3O94766 335 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 PFKMP08237 780 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 UNGP13051 313 aaPredicted RBP8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 WARSP23381 471 aaKnown RBP8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 LMO2P25791 158 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 MAGEA1P43355 309 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 EPHB4P54760 987 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 GALCP54803 685 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 BPIFB4P59827 614 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 WDR5P61964 334 aaKnown RBP8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 NOMO3P69849 1222 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 SPA17Q15506 151 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 CLEC16AQ2KHT3 1053 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 WSCD1Q658N2 575 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 TMCO2Q7Z6W1 182 aaPredicted RBP8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 KIAA1328Q86T90 577 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 VPS36Q86VN1 386 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 PASD1Q8IV76 773 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 ADGRF2Q8IZF7 708 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 ZNF606Q8WXB4 792 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 BADQ92934 168 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 HLA-CQ95604 372 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 ZNF775Q96BV0 537 aaPredicted RBP8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 TMEM176AQ96HP8 235 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 C16orf45Q96MC5 204 aaPredicted RBP8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 UROC1Q96N76 676 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 GDF15Q99988 308 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 LPIN3Q9BQK8 851 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 ISCUQ9H1K1 167 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 DPEP3Q9H4B8 488 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 RC3H2Q9HBD1 1191 aaKnown RBP8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 LZTFL1Q9NQ48 299 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 SEPT11Q9NVA2 429 aaKnown RBP8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 KANSL3Q9P2N6 904 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 SALL4Q9UJQ4 1053 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 ZMYND8Q9ULU4 1186 aaPredicted RBP8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 PCDHGC3Q9UN70 934 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 DUSP10Q9Y6W6 482 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 GBF1Q92538 1859 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 PATJQ8NI35 1801 aa8.61□□□□□ -1.03
DEPDC4-207ENST00000549249 M0QZQ0 153 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 O00370 1275 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 HOXA2O43364 376 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 HUS1O60921 280 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 DGKIO75912 1065 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 UPP2O95045 317 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 IPO7O95373 1038 aaKnown RBP8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 CYP11A1P05108 521 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 VDRP11473 427 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 GZMAP12544 262 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 CD19P15391 556 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 SYN1P17600 705 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 CDH5P33151 784 aaPredicted RBP8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 OR1G1P47890 313 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 SLC11A1P49279 550 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 USP46P62068 366 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 RNASELQ05823 741 aaKnown RBP8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 FPGSQ05932 587 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 PPIGQ13427 754 aaKnown RBP eCLIP8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 CCDC142Q17RM4 750 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 C10orf76Q5T2E6 689 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 KIAA0319Q5VV43 1072 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 NAA35Q5VZE5 725 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 ACAD10Q6JQN1 1059 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 DENND1BQ6P3S1 775 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 DCLRE1AQ6PJP8 1040 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 DSTYKQ6XUX3 929 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 TRIM67Q6ZTA4 783 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 DPH6Q7L8W6 267 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 ACOT1Q86TX2 421 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 UNC93AQ86WB7 457 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 ABI1Q8IZP0 508 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 WDTC1Q8N5D0 677 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 APPL2Q8NEU8 664 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms