RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ATP9AO75110 1047 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 GAS8O95995 478 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 C6orf222P0C671 652 aaPredicted RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 RSPH10BP0C881 870 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SPDYE6P0CI01 402 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 CETPP11597 493 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 CACNA2D1P54289 1103 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 PEX3P56589 373 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 WDR4P57081 412 aaKnown RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 PTK6Q13882 451 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 TCEAL1Q15170 157 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 FAM182AQ5T1J6 154 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 MAP1SQ66K74 1059 aaPredicted RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 KAZNQ674X7 775 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SYDE1Q6ZW31 735 aaPredicted RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 CTAGE3PQ8IX95 158 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 DCLK2Q8N568 766 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SKA2Q8WVK7 121 aaPredicted RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 C10orf82Q8WW14 230 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 C1orf54Q8WWF1 131 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SPOCK2Q92563 424 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SLCO2A1Q92959 643 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 NMD3Q96D46 503 aaKnown RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 GBP5Q96PP8 586 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 IWS1Q96ST2 819 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 MKNK1Q9BUB5 465 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 ANAPC5Q9UJX4 755 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 ZNF711Q9Y462 761 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 TLR3O15455 904 aaKnown RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 CLDN3O15551 220 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 EDF1O60869 148 aaKnown RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 SPAG7O75391 227 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 CELF2O95319 508 aaKnown RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 ASMTLO95671 621 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 CTSHP09668 335 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 T-ENOLP0DO92 83 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 P4HA1P13674 534 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 NR1H3Q13133 447 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 RCN1Q15293 331 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 TRIP13Q15645 432 aaPredicted RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 CNPY1Q3B7I2 92 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 CBWD6Q4V339 395 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 TAF1BQ53T94 588 aaPredicted RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 CBWD3Q5JTY5 395 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SPDYAQ5MJ70 313 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 CBWD5Q5RIA9 395 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SNX30Q5VWJ9 437 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 FYB2Q5VWT5 728 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 NOP9Q86U38 636 aaKnown RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 CATSPER3Q86XQ3 398 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 KBTBD2Q8IY47 623 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 MTMR14Q8NCE2 650 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 GMCL1P1Q8NEA9 526 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 ZNF564Q8TBZ8 553 aaPredicted RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 CD101Q93033 1021 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 CLIP3Q96DZ5 547 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 IFT43Q96FT9 208 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 NACC1Q96RE7 527 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 RUSC1Q9BVN2 902 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 TRAIPQ9BWF2 469 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 TMEM39BQ9GZU3 492 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 HOXC10Q9NYD6 342 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SEPT10Q9P0V9 454 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 PHF24Q9UPV7 400 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 HTTP42858 3142 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 FOXN3O00409 490 aaPredicted RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 DYNC1LI2O43237 492 aaPredicted RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 TGFB1I1O43294 461 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 TRIM49P0CI25 452 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 TRIM49CP0CI26 452 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 GAP43P17677 238 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 PSMC6P62333 389 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 OCRLQ01968 901 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 KCNA1Q09470 495 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 MTMR2Q13614 643 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 KHDC1Q4VXA5 237 aaKnown RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 ZNF362Q5T0B9 420 aaPredicted RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 ZNF746Q6NUN9 644 aaPredicted RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 TRIM50Q86XT4 487 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SMC1BQ8NDV3 1235 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SCG3Q8WXD2 468 aaKnown RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 OPTNQ96CV9 577 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 TEPSINQ96N21 525 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 TIPINQ9BVW5 301 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 FAM192AQ9GZU8 254 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 TLE6Q9H808 572 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SLCO1B3Q9NPD5 702 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 UBN1Q9NPG3 1134 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SAR1AQ9NR31 198 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 DDX18Q9NVP1 670 aaKnown RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 NYAP2Q9P242 653 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 PDP2Q9P2J9 529 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 HEY1Q9Y5J3 304 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 NUMBLQ9Y6R0 609 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 PTPRFP10586 1907 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SSC5DA1L4H1 1573 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 A0A0G2JMZ2 1700 aa5.48□□□□□ -1.53
PROM1-220ENST00000540805 EIF3DO15371 548 aaKnown RBP eCLIP5.48□□□□□ -1.53
PROM1-220ENST00000540805 ATMINO43313 823 aaPredicted RBP5.48□□□□□ -1.53
PROM1-220ENST00000540805 GRIN3BO60391 1043 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms