RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 RFC1P35251 1148 aaPredicted RBP12.16□□□□□ -0.46
C11orf54-214ENST00000540113 MAGEA4P43358 317 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 ASPAP45381 313 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 GRM1Q13255 1194 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 TTLL12Q14166 644 aaPredicted RBP12.16□□□□□ -0.46
C11orf54-214ENST00000540113 KCTD2Q14681 263 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 MAPK6Q16659 721 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 DUOXA2Q1HG44 320 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 RCOR2Q8IZ40 523 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 TCP11Q8WWU5 503 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 KIF9Q9HAQ2 790 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 CD248Q9HCU0 757 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 SAMD15Q9P1V8 674 aa12.16□□□□□ -0.46
C11orf54-214ENST00000540113 ZSWIM8A7E2V4 1837 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 CD48P09326 243 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 PECAM1P16284 738 aaPredicted RBP12.15□□□□□ -0.46
C11orf54-214ENST00000540113 IBSPP21815 317 aaPredicted RBP12.15□□□□□ -0.46
C11orf54-214ENST00000540113 MNAT1P51948 309 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 NRLP54845 237 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 MXD4Q14582 209 aaPredicted RBP12.15□□□□□ -0.46
C11orf54-214ENST00000540113 TAF5Q15542 800 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 PTPN20Q4JDL3 420 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 NUGGCQ68CJ6 796 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 ANKMY2Q8IV38 441 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 ZBTB8OSQ8IWT0 167 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 DHX37Q8IY37 1157 aaKnown RBP12.15□□□□□ -0.46
C11orf54-214ENST00000540113 KIAA0319LQ8IZA0 1049 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 TMEM35BQ8NCS4 154 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 THOC1Q96FV9 657 aaKnown RBP12.15□□□□□ -0.46
C11orf54-214ENST00000540113 PAIP2Q9BPZ3 127 aaKnown RBP12.15□□□□□ -0.46
C11orf54-214ENST00000540113 XYLT2Q9H1B5 865 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 PTPRHQ9HD43 1115 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 HOMER3Q9NSC5 361 aa12.15□□□□□ -0.46
C11orf54-214ENST00000540113 hCG_1818297A0A087WSY0 165 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 GLTPD2A6NH11 291 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 SGK1O00141 431 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 ASAP2O43150 1006 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 GAS2O43903 313 aaKnown RBP12.15□□□□□ -0.47
C11orf54-214ENST00000540113 CALB1P05937 261 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 IL1R2P27930 398 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 EPHX2P34913 555 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 GDF10P55107 478 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 SGSM1Q2NKQ1 1148 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 WDR72Q3MJ13 1102 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 ICE2Q659A1 982 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 ARMC9Q7Z3E5 817 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 CROCCP2Q86T23 111 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 ARFGAP1Q8N6T3 406 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 TWNKQ96RR1 684 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 SDCBP2Q9H190 292 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 KLC4Q9NSK0 619 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 PCSK1NQ9UHG2 260 aa12.15□□□□□ -0.47
C11orf54-214ENST00000540113 PLXNA1Q9UIW2 1896 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 NFICP08651 508 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 TXNP10599 105 aaKnown RBP12.14□□□□□ -0.47
C11orf54-214ENST00000540113 PSMA2P25787 234 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 GCAP28676 217 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 AP3M2P53677 418 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 LACTBP83111 547 aaPredicted RBP12.14□□□□□ -0.47
C11orf54-214ENST00000540113 CAV1Q03135 178 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 RAB6CQ53S08 254 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 PPP1R15BQ5SWA1 713 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 SYCP2LQ5T4T6 812 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 ATF7IP2Q5U623 682 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 MPZL3Q6UWV2 235 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 TSHZ1Q6ZSZ6 1077 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 RBM41Q96IZ5 413 aaKnown RBP12.14□□□□□ -0.47
C11orf54-214ENST00000540113 RAB6CQ9H0N0 254 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 FZD8Q9H461 694 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 EFCC1Q9HA90 598 aa12.14□□□□□ -0.47
C11orf54-214ENST00000540113 ACKR2O00590 384 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 DNALI1O14645 258 aaPredicted RBP12.13□□□□□ -0.47
C11orf54-214ENST00000540113 RASSF9O75901 435 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 TJP3O95049 919 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 CDKN2BP42772 138 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 MBTD1Q05BQ5 628 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 EAPPQ56P03 285 aaPredicted RBP12.13□□□□□ -0.47
C11orf54-214ENST00000540113 EFCAB12Q6NXP0 572 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 ZBED8Q8IZ13 594 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 ZCCHC9Q8N567 271 aaKnown RBP12.13□□□□□ -0.47
C11orf54-214ENST00000540113 ALLCQ8N6M5 410 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 ANKS4BQ8N8V4 417 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 CPB2Q96IY4 423 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 CPXM1Q96SM3 734 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 MPHOSPH6Q99547 160 aaKnown RBP12.13□□□□□ -0.47
C11orf54-214ENST00000540113 RNPEPQ9H4A4 650 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 SMYD3Q9H7B4 428 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 ACTR5Q9H9F9 607 aaPredicted RBP12.13□□□□□ -0.47
C11orf54-214ENST00000540113 VPS37BQ9H9H4 285 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.13□□□□□ -0.471e-9■□□□□ 10.9
C11orf54-214ENST00000540113 EXOC1LA0A1B0GW35 172 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 RASA4BC9J798 803 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 RASA4O43374 803 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 C22orf31O95567 290 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 CYP2C8P10632 490 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 CETN2P41208 172 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 LACTB2Q53H82 288 aaPredicted RBP12.13□□□□□ -0.47
C11orf54-214ENST00000540113 TFDP3Q5H9I0 405 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 C2orf40Q9H1Z8 148 aa12.13□□□□□ -0.47
C11orf54-214ENST00000540113 CDT1Q9H211 546 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms