RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SMIM24O75264 130 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 TNNC2P02585 160 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 HOXC6P09630 235 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 MYBL1P10243 752 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 CD19P15391 556 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 TAS2R40P59535 323 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 NCALDP61601 193 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 ATP11AP98196 1134 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 MBTD1Q05BQ5 628 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 MAMLD1Q13495 774 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 CCL15Q16663 113 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 SGO2Q562F6 1265 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 UHMK1Q8TAS1 419 aaKnown RBP12.2□□□□□ -0.46
USP35-207ENST00000530546 SEC14L1Q92503 715 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.2□□□□□ -0.46
USP35-207ENST00000530546 BTBD19C9JJ37 291 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 GPR25O00155 361 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 C22orf31O95567 290 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 GNAT1P11488 350 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 LACTBP83111 547 aaPredicted RBP12.2□□□□□ -0.46
USP35-207ENST00000530546 LAMB3Q13751 1172 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 SIX1Q15475 284 aaPredicted RBP12.2□□□□□ -0.46
USP35-207ENST00000530546 TAF11Q15544 211 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 TRIP13Q15645 432 aaPredicted RBP12.2□□□□□ -0.46
USP35-207ENST00000530546 SGSM1Q2NKQ1 1148 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 TRIM72Q6ZMU5 477 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 TSHZ1Q6ZSZ6 1077 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 EXOC8Q8IYI6 725 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 ANKRD36BP1Q96IX9 119 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 FZD8Q9H461 694 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 RPF1Q9H9Y2 349 aaKnown RBP12.2□□□□□ -0.46
USP35-207ENST00000530546 PPME1Q9Y570 386 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 IVNS1ABPQ9Y6Y0 642 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 E7ENQ6 273 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 PROSCO94903 275 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 CDC25CP30307 473 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 AP3M2P53677 418 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 CDH8P55286 799 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 RPL7AP62424 266 aaKnown RBP12.19□□□□□ -0.46
USP35-207ENST00000530546 CCNA1P78396 465 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 LBRQ14739 615 aaKnown RBP12.19□□□□□ -0.46
USP35-207ENST00000530546 GPR162Q16538 588 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 FAM133BQ5BKY9 247 aaKnown RBP12.19□□□□□ -0.46
USP35-207ENST00000530546 TAPT1Q6NXT6 567 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 ZDHHC24Q6UX98 284 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 LRRC4CQ9HCJ2 640 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 CHST7Q9NS84 486 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 ZDHHC18Q9NUE0 388 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 GINS2Q9Y248 185 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 DCDC2CA8MYV0 355 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 GH1P01241 217 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 NFICP08651 508 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 VPS41P49754 854 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 SLC26A2P50443 739 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 KCNJ2P63252 427 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 LAMC2Q13753 1193 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 CYP4A22Q5TCH4 519 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 DPP9Q86TI2 863 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 CCDC25Q86WR0 208 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 ERICH1Q86X53 443 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 LMNTD2Q8IXW0 634 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 ATXN2LQ8WWM7 1075 aaKnown RBP12.19□□□□□ -0.46
USP35-207ENST00000530546 TFAP2BQ92481 460 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 RNF25Q96BH1 459 aaPredicted RBP12.19□□□□□ -0.46
USP35-207ENST00000530546 PLVAPQ9BX97 442 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 MRPL47Q9HD33 250 aaKnown RBP12.19□□□□□ -0.46
USP35-207ENST00000530546 PTPRHQ9HD43 1115 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.19□□□□□ -0.46
USP35-207ENST00000530546 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.19□□□□□ -0.46
USP35-207ENST00000530546 AGAP1Q9UPQ3 857 aa12.19□□□□□ -0.46
USP35-207ENST00000530546 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.19□□□□□ -0.46
USP35-207ENST00000530546 GLTPD2A6NH11 291 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 SMIM23A6NLE4 172 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 PI4K2BG5E9Z4 385 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 MMP13P45452 471 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 SURF1Q15526 300 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 ZNF792Q3KQV3 632 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 GALNTL6Q49A17 601 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 ATP13A4Q4VNC1 1196 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 DPH6Q7L8W6 267 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 PHF13Q86YI8 300 aaPredicted RBP12.18□□□□□ -0.46
USP35-207ENST00000530546 KLHL23Q8NBE8 558 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 SHCBP1Q8NEM2 672 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
USP35-207ENST00000530546 ARHGEF3Q9NR81 526 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 GRHL1Q9NZI5 618 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 PCYOX1Q9UHG3 505 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 CNTN6Q9UQ52 1028 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 LACTBL1A8MY62 500 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 IGF2BP3O00425 579 aaKnown RBP eCLIP12.18□□□□□ -0.46
USP35-207ENST00000530546 RALAP11233 206 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 CHN1P15882 459 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 FGFR4P22455 802 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 PROZP22891 400 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 SLC1A1P43005 524 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 PHKA2P46019 1235 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 ZNF132P52740 706 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 PTP4A2Q12974 167 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 WDR72Q3MJ13 1102 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 UBAP2Q5T6F2 1119 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms