RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 SPECC1LQ69YQ0 1117 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 FAM122CQ6P4D5 195 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 MFSD6Q6ZSS7 791 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 EEPD1Q7L9B9 569 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 ZNF444Q8N0Y2 327 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-216ENST00000523088 NAT8LQ8N9F0 302 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 OR7G1Q8NGA0 311 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 DENND1AQ8TEH3 1009 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 SLC9A6Q92581 669 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 HDAC11Q96DB2 347 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 TUBGCP5Q96RT8 1024 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 SLF1Q9BQI6 1058 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 NTPCRQ9BSD7 190 aaKnown RBP7.94□□□□□ -1.14
HDAC3-216ENST00000523088 FSD1Q9BTV5 496 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 NDEL1Q9GZM8 345 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 SPATC1LQ9H0A9 340 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 PUS7LQ9H0K6 701 aaKnown RBP7.94□□□□□ -1.14
HDAC3-216ENST00000523088 PORCNQ9H237 461 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 L2HGDHQ9H9P8 463 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 THAP1Q9NVV9 213 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 RMND1Q9NWS8 449 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 TNFRSF10DQ9UBN6 386 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 GIMAP2Q9UG22 337 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 OGDHLQ9ULD0 1010 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 CBY1Q9Y3M2 126 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 NUMBLQ9Y6R0 609 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 CAPN7Q9Y6W3 813 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 PLIN4Q96Q06 1357 aa7.94□□□□□ -1.14
HDAC3-216ENST00000523088 TRIOBPQ9H2D6 2365 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 C1orf232A0A0U1RR37 186 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 GOLGA8IPA6NC78 632 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 SLC9B1P1A6NJY1 282 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 TSPY2A6NKD2 308 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 SNTNA6NMZ2 147 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 SYCE1LA8MT33 242 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 MATN2O00339 956 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 KRIT1O00522 736 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 ARHGAP33O14559 1287 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 MEFVO15553 781 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-216ENST00000523088 PRKAB2O43741 272 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 CNMDO75829 334 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 MBD3O95983 291 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 ATP5BP06576 529 aaKnown RBP7.93□□□□□ -1.14
HDAC3-216ENST00000523088 S100A9P06702 114 aaKnown RBP7.93□□□□□ -1.14
HDAC3-216ENST00000523088 CYP3A4P08684 503 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 GSTT2P0CG29 244 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 GSTT2BP0CG30 244 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 TSPY3P0CV98 308 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 TSPY8P0CW00 308 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 AKR1B1P15121 316 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 VCLP18206 1134 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 ALAS2P22557 587 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 DNAJB1P25685 340 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 CRABP2P29373 138 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 DSG3P32926 999 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 MAP3K7CLP57077 242 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 HAND2P61296 217 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 TSPY1Q01534 308 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 KRT76Q01546 638 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 GFPT1Q06210 699 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-216ENST00000523088 MCL1Q07820 350 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 CACNB2Q08289 660 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-216ENST00000523088 RIPK1Q13546 671 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 CASP8Q14790 479 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 NR1D2Q14995 579 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 ERCC6LQ2NKX8 1250 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 KLHL38Q2WGJ6 581 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 CEP55Q53EZ4 464 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 LIN54Q6MZP7 749 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 SLC30A10Q6XR72 485 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 KIAA0907Q7Z7F0 614 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-216ENST00000523088 DPP9Q86TI2 863 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 DGKHQ86XP1 1220 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 EPHX4Q8IUS5 362 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 CD302Q8IX05 232 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 ALDH16A1Q8IZ83 802 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 ST13P4Q8IZP2 240 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-216ENST00000523088 ZNF619Q8N2I2 560 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 DNAAF3Q8N9W5 541 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 SLC44A5Q8NCS7 719 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 NAXEQ8NCW5 288 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 IL17RDQ8NFM7 739 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 OR6S1Q8NH40 331 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 FAM71BQ8TC56 605 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 LEO1Q8WVC0 666 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-216ENST00000523088 ANKS1AQ92625 1134 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 BTBD6Q96KE9 485 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 SRPK1Q96SB4 655 aaKnown RBP7.93□□□□□ -1.14
HDAC3-216ENST00000523088 TCF25Q9BQ70 676 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 NUDT16L1Q9BRJ7 211 aaKnown RBP7.93□□□□□ -1.14
HDAC3-216ENST00000523088 ADPGKQ9BRR6 497 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 FUT8Q9BYC5 575 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 NAPBQ9H115 298 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 C11orf49Q9H6J7 331 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 ABCB6Q9NP58 842 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 ALG13Q9NP73 1137 aaKnown RBP7.93□□□□□ -1.14
HDAC3-216ENST00000523088 NYAP2Q9P242 653 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 FNIP2Q9P278 1114 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 GTF2IRD1Q9UHL9 959 aa7.93□□□□□ -1.14
HDAC3-216ENST00000523088 PTBP2Q9UKA9 531 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms