RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SIK2Q9H0K1 926 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 NMRK2Q9NPI5 230 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 PNMA8BQ9ULN7 279 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 NOB1Q9ULX3 412 aaKnown RBP4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 ENTPD2Q9Y5L3 495 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 RBMXL2O75526 392 aaKnown RBP4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 URI1O94763 535 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 UBXN7O94888 489 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 GRPP07492 148 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 EBLN1P0CF75 366 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 JUPP14923 745 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 CLCN2P51788 898 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 PLEKHG6Q3KR16 790 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 LONRF3Q496Y0 759 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 MAVSQ7Z434 540 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 GRASPQ7Z6J2 395 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 SLC35G2Q8TBE7 412 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 DDX17Q92841 729 aaKnown RBP4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 SARAFQ96BY9 339 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 MTFMTQ96DP5 389 aaKnown RBP4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 AIFM3Q96NN9 605 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 SARS2Q9NP81 518 aaKnown RBP4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 SERTAD3Q9UJW9 196 aa4.34□□□□□ -1.71
HMGB1P29-201ENST00000505659 E2F8A0AVK6 867 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 CCDC151A5D8V7 595 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 H3BML4 177 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 SOAT2O75908 522 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 C1RP00736 705 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 NPR1P16066 1061 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 ZFXP17010 805 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 HSPA6P17066 643 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 CD38P28907 300 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 LIPAP38571 399 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 EPHB1P54762 984 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 UCP3P55916 312 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 ARHGAP40Q5TG30 622 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 OVCH2Q7RTZ1 564 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 HAPLN3Q96S86 360 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 TIMP4Q99727 224 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 ZMAT3Q9HA38 289 aaKnown RBP4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 ADARB2Q9NS39 739 aaKnown RBP4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 EHD3Q9NZN3 535 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 SSX2IPQ9Y2D8 614 aa4.33□□□□□ -1.72
HMGB1P29-201ENST00000505659 A0A088AWK7 358 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 hCG_1984214I3L0E3 225 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 ORC4O43929 436 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 TTLL1O95922 423 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 SCGB1D2O95969 90 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 KITP10721 976 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 GPD1P21695 349 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 DRD4P21917 467 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 NHLH1Q02575 133 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 FGL2Q14314 439 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 RGS7BPQ6MZT1 257 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 SWSAP1Q6NVH7 229 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 ZNF788Q6ZQV5 615 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 DAAM2Q86T65 1068 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 ALG8Q9BVK2 526 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 B3GNT5Q9BYG0 378 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 XPR1Q9UBH6 696 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 FRMD4BQ9Y2L6 1034 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 MRPS17Q9Y2R5 130 aaKnown RBP4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 MED16Q9Y2X0 877 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 PLEKHM1Q9Y4G2 1056 aa4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P29-201ENST00000505659 KAT6AQ92794 2004 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 WIPF3A6NGB9 483 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 MANSC4A6NHS7 340 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 TMEM233B4DJY2 109 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 RFPL1O75677 317 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 ATXN1LP0C7T5 689 aaKnown RBP4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 WT1P19544 449 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 PXNP49023 591 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 SLC11A2P49281 568 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 CCT8P50990 548 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 LOXL3P58215 753 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 IQCB1Q15051 598 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 ZIK1Q3SY52 487 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 LAYNQ6UX15 382 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 ZNF280BQ86YH2 543 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 ATG4AQ8WYN0 398 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 NELL1Q92832 810 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 RUNDC1Q96C34 613 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 CAMKK2Q96RR4 588 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 ATP6V0A4Q9HBG4 840 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 SERGEFQ9UGK8 458 aa4.31□□□□□ -1.72
HMGB1P29-201ENST00000505659 A6NNZ2 444 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 TUSC2O75896 110 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 IL6RP08887 468 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 ARFIP2P53365 341 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 BMPR2Q13873 1038 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 TREML2Q5T2D2 321 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 ICE2Q659A1 982 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 NPNTQ6UXI9 565 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 SLC15A4Q8N697 577 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 DNAJC5GQ8N7S2 189 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 ATRIPQ8WXE1 791 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 DDB2Q92466 427 aa4.3□□□□□ -1.72
HMGB1P29-201ENST00000505659 DPF1Q92782 380 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms