RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 MYCBPAPQ8TBZ2 947 aa20.65■□□□□ 0.9
PCOLCE-208ENST00000487172 SPPL2BQ8TCT7 592 aa20.65■□□□□ 0.9
PCOLCE-208ENST00000487172 TWNKQ96RR1 684 aa20.65■□□□□ 0.9
PCOLCE-208ENST00000487172 LSM14BQ9BX40 385 aaKnown RBP20.65■□□□□ 0.9
PCOLCE-208ENST00000487172 DPEP3Q9H4B8 488 aa20.65■□□□□ 0.9
PCOLCE-208ENST00000487172 TMLHEQ9NVH6 421 aa20.65■□□□□ 0.9
PCOLCE-208ENST00000487172 DZANK1Q9NVP4 752 aa20.65■□□□□ 0.9
PCOLCE-208ENST00000487172 CNTN6Q9UQ52 1028 aa20.65■□□□□ 0.9
PCOLCE-208ENST00000487172 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 LINC01565O15544 149 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 PAPLNO95428 1278 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 VNN2O95498 520 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 ELF1P32519 619 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 RAD23BP54727 409 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 PSMC1P62191 440 aaKnown RBP20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 APBA1Q02410 837 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 ADCY1Q08828 1119 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 LLGL2Q6P1M3 1020 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 GJB7Q6PEY0 223 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 TMEM176AQ96HP8 235 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 FUBP3Q96I24 572 aaKnown RBP eCLIP20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 NAA15Q9BXJ9 866 aaKnown RBP20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 ELOVL4Q9GZR5 314 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 ABCB6Q9NP58 842 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 MAN1C1Q9NR34 630 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 HMGXB4Q9UGU5 601 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 DNAJC12Q9UKB3 198 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 PCDHB5Q9Y5E4 795 aa20.64■□□□□ 0.89
PCOLCE-208ENST00000487172 NOL4O94818 638 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 UCHL3P15374 230 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 HOXB8P17481 243 aaPredicted RBP20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 LTBRP36941 435 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 RBM10P98175 930 aaKnown RBP20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 CFAP221Q4G0U5 840 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 IQCEQ6IPM2 695 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 C4orf50Q6ZRC1 276 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 CCDC149Q6ZUS6 474 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 ACOT1Q86TX2 421 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 SLC4A11Q8NBS3 891 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 MAFAQ8NHW3 353 aaPredicted RBP20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 PCED1BQ96HM7 432 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 GANQ9H2C0 597 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 CLDND1Q9NY35 253 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 IFNKQ9P0W0 207 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 PCDHB4Q9Y5E5 795 aa20.63■□□□□ 0.89
PCOLCE-208ENST00000487172 ZMYND10O75800 440 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 SEC24AO95486 1093 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 SPATA31D3P0C874 917 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 HOXA9P31269 272 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 TUFMP49411 452 aaKnown RBP20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 KLK7P49862 253 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 DUSP4Q13115 394 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 LIN9Q5TKA1 542 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 ANKRD54Q6NXT1 300 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 SPATA31D4Q6ZUB0 917 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 ATAD1Q8NBU5 361 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 NEK11Q8NG66 645 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 PPM1EQ8WY54 764 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 SHC3Q92529 594 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 PCMTD1Q96MG8 357 aaPredicted RBP20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 PGLYRP2Q96PD5 576 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 STK33Q9BYT3 514 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 CYP4F11Q9HBI6 524 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 CLEC1BQ9P126 229 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 KIAA1257Q9ULG3 409 aa20.62■□□□□ 0.89
PCOLCE-208ENST00000487172 CBFA2T2O43439 604 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 TBX10O75333 385 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 TPM3P06753 285 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 C8AP07357 584 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 PAEPP09466 180 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 PBX1P40424 430 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 ZNF132P52740 706 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 DLX2Q07687 328 aaPredicted RBP20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 ARHGAP44Q17R89 818 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 ZNF394Q53GI3 561 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 MDH1BQ5I0G3 518 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 SARM1Q6SZW1 724 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 TMEM270Q6UE05 265 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 SPATA2LQ8IUW3 424 aaPredicted RBP20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 CMASQ8NFW8 434 aaPredicted RBP20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 MYLPFQ96A32 169 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 MSLNLQ96KJ4 702 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 RHOBTB2Q9BYZ6 727 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 CRISPLD1Q9H336 500 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 SFXN1Q9H9B4 322 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 FAM207AQ9NSI2 230 aaPredicted RBP20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 ZDHHC7Q9NXF8 308 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 CEP72Q9P209 647 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 AJAP1Q9UKB5 411 aaPredicted RBP20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 COG5Q9UP83 839 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 FHOD1Q9Y613 1164 aa20.61■□□□□ 0.89
PCOLCE-208ENST00000487172 RNF225M0QZC1 329 aaPredicted RBP20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 POU2F2P09086 479 aa20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 HNRNPA1P09651 372 aaKnown RBP eCLIP20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 HAPLN1P10915 354 aaPredicted RBP20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 MAGEA11P43364 429 aa20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 ORC1Q13415 861 aa20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 CCDC142Q17RM4 750 aa20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 SYCE2Q6PIF2 218 aa20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 VSTM1Q6UX27 236 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms