RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 SLC43A1O75387 559 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 NDST3O95803 873 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 ANXA1P04083 346 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 PYGLP06737 847 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 GJB1P08034 283 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 SBK3P0C264 359 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 RAP2AP10114 183 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 TXNP10599 105 aaKnown RBP5.28□□□□□ -1.56
VPS13A-211ENST00000484581 GABRB3P28472 473 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 RPS19P39019 145 aaKnown RBP5.28□□□□□ -1.56
VPS13A-211ENST00000484581 NOMO3P69849 1222 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 MXRA7P84157 204 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 TAF5Q15542 800 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 USP17L6PQ6QN14 398 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 Q6ZSN1 163 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 ZNF365Q70YC5 407 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 SUGP1Q8IWZ8 645 aaKnown RBP5.28□□□□□ -1.56
VPS13A-211ENST00000484581 OR56A3Q8NH54 315 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 STT3BQ8TCJ2 826 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 IPO4Q8TEX9 1081 aaKnown RBP5.28□□□□□ -1.56
VPS13A-211ENST00000484581 DDX17Q92841 729 aaKnown RBP5.28□□□□□ -1.56
VPS13A-211ENST00000484581 EID2BQ96D98 161 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 INO80BQ9C086 356 aaPredicted RBP5.28□□□□□ -1.56
VPS13A-211ENST00000484581 KIAA1683Q9H0B3 1180 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 OR10A2Q9H208 303 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 KCNH6Q9H252 994 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 SLC6A15Q9H2J7 730 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 GPR35Q9HC97 309 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 RASSF1Q9NS23 344 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 RGL1Q9NZL6 768 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 JKAMPQ9P055 326 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 C11orf21Q9P2W6 132 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 FBXO2Q9UK22 296 aaPredicted RBP5.28□□□□□ -1.56
VPS13A-211ENST00000484581 ITGB1BP2Q9UKP3 347 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 FAM184BQ9ULE4 1060 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 CRYL1Q9Y2S2 319 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 TMEM98Q9Y2Y6 226 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 LAS1LQ9Y4W2 734 aaKnown RBP5.28□□□□□ -1.56
VPS13A-211ENST00000484581 SLC30A1Q9Y6M5 507 aa5.28□□□□□ -1.56
VPS13A-211ENST00000484581 IPO5O00410 1097 aaKnown RBP5.27□□□□□ -1.57
VPS13A-211ENST00000484581 PLSCR1O15162 318 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 DNAJB5O75953 348 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 UNC5CO95185 931 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 IDEP14735 1019 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 ATP5JP18859 108 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 IL1R2P27930 398 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 SLC11A2P49281 568 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 COPAP53621 1224 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 ADAM8P78325 824 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 APBA1Q02410 837 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 FBXO47Q5MNV8 452 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 DCAF12L1Q5VU92 463 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 KRT40Q6A162 431 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 LIN54Q6MZP7 749 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 RETSATQ6NUM9 610 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 KRT28Q7Z3Y7 464 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 YAF2Q8IY57 180 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 AOPEPQ8N6M6 819 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 DNAJC5GQ8N7S2 189 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 GLIS1Q8NBF1 620 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 CCDC150Q8NCX0 1101 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 NLGN4YQ8NFZ3 816 aaPredicted RBP5.27□□□□□ -1.57
VPS13A-211ENST00000484581 SPPL3Q8TCT6 385 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 STYXQ8WUJ0 223 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 SPSB4Q96A44 273 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 LRRC46Q96FV0 321 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 CEP95Q96GE4 821 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 SNX27Q96L92 541 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 PLEKHG4BQ96PX9 1271 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 SEC62Q99442 399 aaKnown RBP5.27□□□□□ -1.57
VPS13A-211ENST00000484581 NDC1Q9BTX1 674 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 KATNAL1Q9BW62 490 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 PLA2G12BQ9BX93 195 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 STK31Q9BXU1 1019 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 ENKD1Q9H0I2 346 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 IGSF9Q9P2J2 1179 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 SLC23A1Q9UHI7 598 aa5.27□□□□□ -1.57
VPS13A-211ENST00000484581 SETD1BQ9UPS6 1966 aaKnown RBP5.27□□□□□ -1.57
VPS13A-211ENST00000484581 CXorf49A8MYA2 514 aaPredicted RBP5.26□□□□□ -1.57
VPS13A-211ENST00000484581 TMEM233B4DJY2 109 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 KIAA0391O15091 583 aaKnown RBP5.26□□□□□ -1.57
VPS13A-211ENST00000484581 KCNQ3O43525 872 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 NARSO43776 548 aaKnown RBP5.26□□□□□ -1.57
VPS13A-211ENST00000484581 HAUS5O94927 633 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 INMTO95050 263 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 A1BGP04217 495 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 GRPP07492 148 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 CASRP41180 1078 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 PHKA1P46020 1223 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 RXRGP48443 463 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 GZMKP49863 264 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 EIF5P55010 431 aaKnown RBP5.26□□□□□ -1.57
VPS13A-211ENST00000484581 BPIFB4P59827 614 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 IRX6P78412 446 aaPredicted RBP5.26□□□□□ -1.57
VPS13A-211ENST00000484581 DGCR2P98153 550 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 HHEXQ03014 270 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 NFYCQ13952 458 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 EFR3AQ14156 821 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 MFSD14BQ5SR56 506 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 L1TD1Q5T7N2 865 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms