RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	ITGAL	P20701	1170 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	MAK	P20794	623 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	GATA3	P23771	443 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	NPTX2	P47972	431 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	NDUFV1	P49821	464 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	ZNF134	P52741	427 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	INHBC	P55103	352 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	LILRA4	P59901	499 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	TAP2	Q03519	686 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	IQCB1	Q15051	598 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	LY6G5C	Q5SRR4	150 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	SYCP2L	Q5T4T6	812 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	DCAF12L1	Q5VU92	463 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	MICALCL	Q6ZW33	695 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	GPR149	Q86SP6	731 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	MICU3	Q86XE3	530 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	ASB10	Q8WXI3	467 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	NMD3	Q96D46	503 aa	Known RBP	5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	PTCD3	Q96EY7	689 aa	Known RBP	5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	HEPH	Q9BQS7	1158 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	WDR11	Q9BZH6	1224 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	ZNF518B	Q9C0D4	1074 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	MS4A7	Q9GZW8	240 aa	Predicted RBP	5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	BTBD1	Q9H0C5	482 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	IKZF4	Q9H2S9	585 aa		5.22	□□□□□ -1.57
RBM39-231	ENST00000477334	TES	Q9UGI8	421 aa	Known RBP	5.22	□□□□□ -1.57
RBM39-231	ENST00000477334		A0A0B4J269	797 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334		F8W8V4	182 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	PRIM2	P49643	509 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	SCAP	Q12770	1279 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	TUBB3	Q13509	450 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	HLX	Q14774	488 aa	Predicted RBP	5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	SP5	Q6BEB4	398 aa	Predicted RBP	5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	LAYN	Q6UX15	382 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	TMEM108	Q6UXF1	575 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	FAM9A	Q8IZU1	332 aa	Predicted RBP	5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	OR56A3	Q8NH54	315 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	STK31	Q9BXU1	1019 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	SERHL2	Q9H4I8	314 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	A1CF	Q9NQ94	594 aa	Known RBP	5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	TBCCD1	Q9NVR7	557 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	SLC52A1	Q9NWF4	448 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	TBC1D30	Q9Y2I9	924 aa		5.21	□□□□□ -1.58
RBM39-231	ENST00000477334	PYCARD-AS1	I3L0S3	204 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	ATXN1L	P0C7T5	689 aa	Known RBP	5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	RPL17	P18621	184 aa	Known RBP	5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	VIPR2	P41587	438 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	PXN	P49023	591 aa	Predicted RBP	5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	IFIT5	Q13325	482 aa	Known RBP	5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	PTPA	Q15257	358 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	SF3B3	Q15393	1217 aa	Known RBP	5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	LONRF1	Q17RB8	773 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	LDLRAD3	Q86YD5	345 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	ZNF280B	Q86YH2	543 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	VRK3	Q8IV63	474 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	LIX1L	Q8IVB5	337 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	SLC30A5	Q8TAD4	765 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	SSH3	Q8TE77	659 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	LARP4B	Q92615	738 aa	Known RBP	5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	MOGAT1	Q96PD6	335 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	PNPLA8	Q9NP80	782 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	INTS13	Q9NVM9	706 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	C11orf21	Q9P2W6	132 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	PHTF1	Q9UMS5	762 aa		5.2	□□□□□ -1.58
RBM39-231	ENST00000477334	PIPSL	A2A3N6	862 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	TRIAP1	O43715	76 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	RASSF9	O75901	435 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	SOAT2	O75908	522 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	EGR2	P11161	476 aa	Predicted RBP	5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	CYP2C9	P11712	490 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	PPP3CB	P16298	524 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	CD6	P30203	668 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	ZEB1	P37275	1124 aa	Predicted RBP	5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	INHBE	P58166	350 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	LOXL3	P58215	753 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	KRT17	Q04695	432 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	ZNF543	Q08ER8	600 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	SMN1	Q16637	294 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	PLA1A	Q53H76	456 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	RBM20	Q5T481	1227 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	VPS53	Q5VIR6	699 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	ZDHHC24	Q6UX98	284 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	TSHZ1	Q6ZSZ6	1077 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	C11orf96	Q7Z7L8	435 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	LCORL	Q8N3X6	602 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	CCDC33	Q8N5R6	958 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	LPIN2	Q92539	896 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	SPSB4	Q96A44	273 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	FUBP1	Q96AE4	644 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	MSLNL	Q96KJ4	702 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334		Q96MF0	132 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	STRBP	Q96SI9	672 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	MESP1	Q9BRJ9	268 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	UNK	Q9C0B0	810 aa	Known RBP	5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	CASS4	Q9NQ75	786 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	ITGB1BP2	Q9UKP3	347 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	SHOC2	Q9UQ13	582 aa		5.19	□□□□□ -1.58
RBM39-231	ENST00000477334	PAXBP1	Q9Y5B6	917 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms