RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 AFPP02771 609 aaKnown RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 MT-ND5P03915 603 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 A1BGP04217 495 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 AMY2AP04746 511 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 FTH1P19P0C7X4 201 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TMIGD3P0DMS9 266 aaPredicted RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TYRP14679 529 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 GSPT1P15170 499 aaKnown RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 GAP43P17677 238 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 RXRAP19793 462 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 AMY2BP19961 511 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 CD33P20138 364 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TGM1P22735 817 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 SDHAP31040 664 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ACSL1P33121 698 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 NTF4P34130 210 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 GRK5P34947 590 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 PSMC2P35998 433 aaKnown RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 PSMB10P40306 273 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 PAFAH1B1P43034 410 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 PSMC4P43686 418 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF41P51814 821 aaPredicted RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 HNRNPMP52272 730 aaKnown RBP eCLIP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 RAD23AP54725 363 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 SESN2P58004 480 aaPredicted RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 NLRP5P59047 1200 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 RPL11P62913 178 aaKnown RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 DLG4P78352 724 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 CDK17Q00537 523 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 COX10Q12887 443 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 CUL4BQ13620 913 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 IL10RAQ13651 578 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TMEM132BQ14DG7 1078 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 RABEP1Q15276 862 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ADIPOQQ15848 244 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 KYNUQ16719 465 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ATP2B3Q16720 1220 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 AOC3Q16853 763 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TRIM71Q2Q1W2 868 aaKnown RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 DUSP28Q4G0W2 176 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 FIGNQ5HY92 759 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 KHDC1LQ5JSQ8 128 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 DEPDC1Q5TB30 811 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ERICH6BQ5W0A0 696 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ATG16L1Q676U5 607 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 RAB12Q6IQ22 244 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 IRGCQ6NXR0 463 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 USP17L6PQ6QN14 398 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 PET117Q6UWS5 81 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 BTNL9Q6UXG8 535 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ATF7IPQ6VMQ6 1270 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 RIPOR1Q6ZS17 1223 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 RUFY3Q7L099 469 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 LRRC8DQ7L1W4 858 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 KRT27Q7Z3Y8 459 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 HEATR3Q7Z4Q2 680 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ANKS1BQ7Z6G8 1248 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 METTL23Q86XA0 190 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 COL23A1Q86Y22 540 aaPredicted RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TBC1D21Q8IYX1 336 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TTC39CQ8N584 583 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 AOPEPQ8N6M6 819 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 IL22RA1Q8N6P7 574 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 POMGNT2Q8NAT1 580 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 OR6B3Q8NGW1 331 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 DNAJB8Q8NHS0 232 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ETNPPLQ8TBG4 499 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 BRSK1Q8TDC3 778 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF384Q8TF68 577 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 XAGE3Q8WTP9 111 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ZFAND2BQ8WV99 257 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 MAML1Q92585 1016 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 HSPH1Q92598 858 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 KCNN1Q92952 543 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 RILPL2Q969X0 211 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 EXOC4Q96A65 974 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 NEIL1Q96FI4 390 aaPredicted RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 RBM18Q96H35 190 aaKnown RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 COX4I2Q96KJ9 171 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 FCRL3Q96P31 734 aaPredicted RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 GBP5Q96PP8 586 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 RAB3IPQ96QF0 476 aaPredicted RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TWNKQ96RR1 684 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 FNBP1Q96RU3 617 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 RBM15Q96T37 977 aaKnown RBP eCLIP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 GDF15Q99988 308 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ACAT2Q9BWD1 397 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TWSG1Q9GZX9 223 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 PABPC3Q9H361 631 aaKnown RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 WDCPQ9H6R7 721 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 GREM2Q9H772 168 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 PFDN4Q9NQP4 134 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 NDFIP2Q9NV92 336 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 HCFC1R1Q9NWW0 138 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 CLDND1Q9NY35 253 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 COL20A1Q9P218 1284 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 HCN2Q9UL51 889 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ATXN7L1Q9ULK2 861 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms