RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 RAB42Q8N4Z0 105 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 SH3GL1Q99961 368 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 MRGBPQ9NV56 204 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 CCDC88AQ3V6T2 1871 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 TBX10O75333 385 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 KRT36O76013 467 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 ARIH2O95376 493 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 EIF4BP23588 611 aaKnown RBP12.02□□□□□ -0.49
U2AF1-209ENST00000475639 CHRNA3P32297 505 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 ZNF571Q7Z3V5 609 aaPredicted RBP12.02□□□□□ -0.49
U2AF1-209ENST00000475639 TBC1D19Q8N5T2 526 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 TUBGCP5Q96RT8 1024 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 TRIM62Q9BVG3 475 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 KANSL2Q9H9L4 492 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 SLC52A2Q9HAB3 445 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 SENP1Q9P0U3 644 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 ANAPC7Q9UJX3 599 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 SESN1Q9Y6P5 492 aa12.02□□□□□ -0.49
U2AF1-209ENST00000475639 LDHAP00338 332 aaKnown RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 KITP10721 976 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 RALBP11234 206 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 PGM1P36871 562 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 LRRC63Q05C16 580 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 WDR72Q3MJ13 1102 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 FASTKD1Q53R41 847 aaKnown RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 AARS2Q5JTZ9 985 aaKnown RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 PPP4R3CPQ6ZMV5 832 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 DDIASQ8IXT1 998 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 CLEC4FQ8N1N0 589 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 RASGRP4Q8TDF6 673 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 DIS3LQ8TF46 1054 aaKnown RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 AGBL1Q96MI9 1066 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 MIPEPQ99797 713 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 BBS2Q9BXC9 721 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 TTC7AQ9ULT0 858 aaPredicted RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 HEY1Q9Y5J3 304 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 CCDC166P0CW27 439 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 FOXN2P32314 431 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 RPL21P46778 160 aaKnown RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 TROAPQ12815 778 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 KPNB1Q14974 876 aaKnown RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 CCDC149Q6ZUS6 474 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 SCFD1Q8WVM8 642 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 MTERF3Q96E29 417 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 ASNSD1Q9NWL6 643 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 NAGPAQ9UK23 515 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 RPL26L1Q9UNX3 145 aaKnown RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 TRAFD1O14545 582 aaPredicted RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 EIF2S1P05198 315 aaKnown RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 MARK3P27448 753 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 NEK3P51956 506 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 DRG2P55039 364 aaKnown RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 RIC1Q4ADV7 1423 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 ITPRIPL1Q6GPH6 555 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 LVRNQ6Q4G3 990 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 PRUNE1Q86TP1 453 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 SRBD1Q8N5C6 995 aaKnown RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 ATP11CQ8NB49 1132 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 MAGEB18Q96M61 343 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 NDEL1Q9GZM8 345 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 SCN3BQ9NY72 215 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 SEPT3Q9UH03 358 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 GOLGA8IPA6NC78 632 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 ZNF189O75820 626 aaPredicted RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 ASLP04424 464 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 NFX1Q12986 1120 aaKnown RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 MAPK7Q13164 816 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 ACSBG2Q5FVE4 666 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 HSPH1Q92598 858 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 EME1Q96AY2 570 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 FOPNLQ96NB1 174 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 GCOM2Q9BZD3 368 aaPredicted RBP12.01□□□□□ -0.49
U2AF1-209ENST00000475639 TLE6Q9H808 572 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 NDFIP2Q9NV92 336 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 TBC1D30Q9Y2I9 924 aa12.01□□□□□ -0.49
U2AF1-209ENST00000475639 NPHP3-ACAD11A0A0J9YXS1 232 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 TMEM221A6NGB7 291 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 GSTA3Q16772 222 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 CABLES1Q8TDN4 633 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 SLC35B4Q969S0 331 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 KCNK16Q96T55 309 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 TOPORSQ9NS56 1045 aaPredicted RBP12□□□□□ -0.49
U2AF1-209ENST00000475639 USE1Q9NZ43 259 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 C6orf203Q9P0P8 240 aaPredicted RBP12□□□□□ -0.49
U2AF1-209ENST00000475639 POLIQ9UNA4 740 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 CHMP2BQ9UQN3 213 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 HSPA2P54652 639 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 SLC34A1Q06495 639 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 STXBP2Q15833 593 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 TXNRD1Q16881 649 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 P3H1Q32P28 736 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 KRT77Q7Z794 578 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 STKLD1Q8NE28 680 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 GLIS3Q8NEA6 775 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 ZNF184Q99676 751 aaPredicted RBP12□□□□□ -0.49
U2AF1-209ENST00000475639 MXD3Q9BW11 206 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 FAM187AA6NFU0 413 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 ITGA2BP08514 1039 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 SDC4P31431 198 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 NUP62P37198 522 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms