RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 MICALCLQ6ZW33 695 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 MRGPRGQ86SM5 289 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 ADGRG5Q8IZF4 528 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 BEND2Q8NDZ0 799 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 FBXO41Q8TF61 875 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 LINC00476Q8WZB0 136 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 NMD3Q96D46 503 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 CHFRQ96EP1 664 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 INTS13Q9NVM9 706 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 TBCCD1Q9NVR7 557 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 XPR1Q9UBH6 696 aa4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 EPN1Q9Y6I3 576 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC13-204ENST00000438419 TRIM43BA6NCK2 446 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 TMEM191CA6NGB0 347 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 ITGAMP11215 1152 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 NPTX2P47972 431 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 GCLCP48506 637 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 NDUFV1P49821 464 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 INHBCP55103 352 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 UCP3P55916 312 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 LOXL3P58215 753 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 TGFB2P61812 414 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 FMO1Q01740 532 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 COL10A1Q03692 680 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 IQCB1Q15051 598 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 LAYNQ6UX15 382 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 DNAJC5GQ8N7S2 189 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 TRIM43Q96BQ3 446 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 MSLNLQ96KJ4 702 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 SLC46A1Q96NT5 459 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 SMURF2Q9HAU4 748 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 STK32BQ9NY57 414 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 CPNE7Q9UBL6 633 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 TESQ9UGI8 421 aaKnown RBP4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 SHOC2Q9UQ13 582 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 DMRT1Q9Y5R6 373 aa4.52□□□□□ -1.69
TRAPPC13-204ENST00000438419 ARID4BQ4LE39 1312 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 MBD3L4A6NDZ8 208 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 MBD3L3A6NE82 208 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 APAF1O14727 1248 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 PMM2O15305 246 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 TRIAP1O43715 76 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 GCP02774 474 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 CHRM3P20309 590 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 TGM1P22735 817 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 GATA3P23771 443 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 TOB1P50616 345 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 TAP1Q03518 808 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 FSTL1Q12841 308 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 FOXI1Q12951 378 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 CTBP1Q13363 440 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 PICALMQ13492 652 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 CD300EQ496F6 205 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 HECTD2Q5U5R9 776 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 FAM9AQ8IZU1 332 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 MPP5Q8N3R9 675 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 LCORLQ8N3X6 602 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 SLC15A4Q8N697 577 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 GPR150Q8NGU9 434 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 MAML1Q92585 1016 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 PHKBQ93100 1093 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 Q96MF0 132 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 OSBPL9Q96SU4 736 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 AGAP2Q99490 1192 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 APOL5Q9BWW9 433 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 UNKQ9C0B0 810 aaKnown RBP4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 TTYH3Q9C0H2 523 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 A1CFQ9NQ94 594 aaKnown RBP4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 SACM1LQ9NTJ5 587 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 DMTF1Q9Y222 760 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 SNX13Q9Y5W8 968 aa4.51□□□□□ -1.69
TRAPPC13-204ENST00000438419 SALL3Q9BXA9 1300 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 A0A087X1B8 175 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 A0A0B4J269 797 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 RHPN2P1A8MT19 583 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 F5H697 171 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 RAMP2O60895 175 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 SLC5A1P13866 664 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 ZKSCAN1P17029 563 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 KLRC1P26715 233 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 MPLP40238 635 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 AVPR1BP47901 424 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 SEC24CP53992 1094 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 IFIT5Q13325 482 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 TUBB3Q13509 450 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 BOP1Q14137 746 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 SYCP2LQ5T4T6 812 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 SFRP4Q6FHJ7 346 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 MICU3Q86XE3 530 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 LNX2Q8N448 690 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 PTCD3Q96EY7 689 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 ZC3H10Q96K80 434 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 COQ10AQ96MF6 247 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 STRBPQ96SI9 672 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 NELL2Q99435 816 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 SMOC2Q9H3U7 446 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 CYP4F11Q9HBI6 524 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 PNPLA8Q9NP80 782 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 ZSCAN32Q9NX65 697 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms