RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 MED15Q96RN5 788 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 RBM12Q9NTZ6 932 aaKnown RBP11.17□□□□□ -0.62
NOD1-206ENST00000434755 ABCF3Q9NUQ8 709 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 SENP1Q9P0U3 644 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 RGPD3A6NKT7 1758 aaPredicted RBP11.17□□□□□ -0.62
NOD1-206ENST00000434755 RGPD4Q7Z3J3 1758 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 ATP9AO75110 1047 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 PRKAR2AP13861 404 aaKnown RBP11.17□□□□□ -0.62
NOD1-206ENST00000434755 MSH2P43246 934 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 C1QBPQ07021 282 aaKnown RBP11.17□□□□□ -0.62
NOD1-206ENST00000434755 ROPN1BQ9BZX4 212 aaPredicted RBP11.17□□□□□ -0.62
NOD1-206ENST00000434755 TMEM117Q9H0C3 514 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 ROPN1Q9HAT0 212 aaPredicted RBP11.17□□□□□ -0.62
NOD1-206ENST00000434755 DPP3Q9NY33 737 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 ZNF536O15090 1300 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 MOXD2PA6NHM9 499 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 SRGAP2BP0DMP2 458 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 GRK4P32298 578 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 CRYBB1P53674 252 aaPredicted RBP11.17□□□□□ -0.62
NOD1-206ENST00000434755 GHRHRQ02643 423 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 KCNMA1Q12791 1236 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 SNX17Q15036 470 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 COPS5Q92905 334 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 MCUR1Q96AQ8 359 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 TTYH3Q9C0H2 523 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 SAYSD1Q9NPB0 183 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 NCANO14594 1321 aa11.17□□□□□ -0.62
NOD1-206ENST00000434755 EFCAB14O75071 495 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 EIF4BP23588 611 aaKnown RBP11.16□□□□□ -0.62
NOD1-206ENST00000434755 GGCXP38435 758 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 GRIK1P39086 918 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 PTENP60484 403 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 BYSLQ13895 437 aaKnown RBP11.16□□□□□ -0.62
NOD1-206ENST00000434755 GRB14Q14449 540 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 SLC35G1Q2M3R5 365 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 PRAMEF19Q5SWL8 479 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 SV2AQ7L0J3 742 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 APTXQ7Z2E3 356 aaKnown RBP11.16□□□□□ -0.62
NOD1-206ENST00000434755 NOA1Q8NC60 698 aaKnown RBP11.16□□□□□ -0.62
NOD1-206ENST00000434755 ERP44Q9BS26 406 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 TRAIPQ9BWF2 469 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 MTMR12Q9C0I1 747 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 HPCAL4Q9UM19 191 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 MMP3P08254 477 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 SETSIPP0DME0 302 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 SMIM10L2AP0DMW4 78 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 SMIM10L2BP0DMW5 78 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 GARSP41250 739 aaKnown RBP11.16□□□□□ -0.62
NOD1-206ENST00000434755 BTBD8Q5XKL5 378 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 MTHFD1LQ6UB35 978 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 FEZF2Q8TBJ5 459 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 FUT8Q9BYC5 575 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 RNF208Q9H0X6 261 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 PIDD1Q9HB75 910 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 FIS1Q9Y3D6 152 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 DOCK2Q92608 1830 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 CACNA1SQ13698 1873 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 THP07101 528 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 SKIV2LQ15477 1246 aaKnown RBP11.16□□□□□ -0.62
NOD1-206ENST00000434755 CPB2Q96IY4 423 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 KLHL14Q9P2G3 628 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 ADAMTS5Q9UNA0 930 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 DUSP10Q9Y6W6 482 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 UMODL1Q5DID0 1318 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 COMTP21964 271 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 PTGISQ16647 500 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 KLHL38Q2WGJ6 581 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 ARHGAP24Q8N264 748 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 ARHGAP18Q8N392 663 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 TMEM161BQ8NDZ6 487 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 KLC2Q9H0B6 622 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 COL20A1Q9P218 1284 aa11.16□□□□□ -0.62
NOD1-206ENST00000434755 SUN1O94901 812 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 GLRA2P23416 452 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 LHX1P48742 406 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 MRPS6P82932 125 aaKnown RBP11.15□□□□□ -0.62
NOD1-206ENST00000434755 KCNA1Q09470 495 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 STAT4Q14765 748 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 ECM1Q16610 540 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 CLEC16AQ2KHT3 1053 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 TTC31Q49AM3 519 aaPredicted RBP11.15□□□□□ -0.62
NOD1-206ENST00000434755 GPAT2Q6NUI2 795 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 LRRC31Q6UY01 552 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 TAS1R2Q8TE23 839 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 HASPINQ8TF76 798 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 DDX50Q9BQ39 737 aaKnown RBP11.15□□□□□ -0.62
NOD1-206ENST00000434755 MLXIPLQ9NP71 852 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 G3BP2Q9UN86 482 aaKnown RBP11.15□□□□□ -0.62
NOD1-206ENST00000434755 DERAQ9Y315 318 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 TGFB1I1O43294 461 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 RALAP11233 206 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 VDRP11473 427 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 CA4P22748 312 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 BRD2P25440 801 aaKnown RBP11.15□□□□□ -0.62
NOD1-206ENST00000434755 COG7P83436 770 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 CCDC62Q6P9F0 684 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 CDKL3Q8IVW4 592 aaPredicted RBP11.15□□□□□ -0.62
NOD1-206ENST00000434755 AFAP1L2Q8N4X5 818 aa11.15□□□□□ -0.62
NOD1-206ENST00000434755 DNAJB3Q8WWF6 145 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms