RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 H7C4K7 107 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 I3L4J1 428 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 HNRNPDLO14979 420 aaKnown RBP11.13□□□□□ -0.63
HOXD3-203ENST00000432796 OPHN1O60890 802 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 FTH1P19P0C7X4 201 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 MARCKSP29966 332 aaPredicted RBP11.13□□□□□ -0.63
HOXD3-203ENST00000432796 MCM4P33991 863 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 DPP6P42658 865 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 BRCC3P46736 316 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 CLCNKBP51801 687 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 AMPD2Q01433 879 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 PPP2R3AQ06190 1150 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 DHX8Q14562 1220 aaKnown RBP11.13□□□□□ -0.63
HOXD3-203ENST00000432796 TRIP6Q15654 476 aaKnown RBP11.13□□□□□ -0.63
HOXD3-203ENST00000432796 NT5DC1Q5TFE4 455 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 ZPBP2Q6X784 338 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 C1orf186Q6ZWK4 172 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 RASSF3Q86WH2 238 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 MYCT1Q8N699 235 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 TSTD1Q8NFU3 115 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 LRRC3Q9BY71 257 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 TPSD1Q9BZJ3 242 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 CXCL16Q9H2A7 254 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 PARVGQ9HBI0 331 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 TMEM74BQ9NUR3 256 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 THG1LQ9NWX6 298 aaKnown RBP11.13□□□□□ -0.63
HOXD3-203ENST00000432796 AFF4Q9UHB7 1163 aaKnown RBP11.13□□□□□ -0.63
HOXD3-203ENST00000432796 VWA8A3KMH1 1905 aa11.13□□□□□ -0.63
HOXD3-203ENST00000432796 EML5Q05BV3 1969 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 PODXLO00592 558 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 SYN3O14994 580 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 PRAMEF12O95522 483 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 CD59P13987 128 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 RPL9P32969 192 aaKnown RBP11.12□□□□□ -0.63
HOXD3-203ENST00000432796 HOXD12P35452 270 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 ABCG1P45844 678 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 SF3A1Q15459 793 aaKnown RBP11.12□□□□□ -0.63
HOXD3-203ENST00000432796 UPP1Q16831 310 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 TMEM119Q4V9L6 283 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 LPCAT2Q7L5N7 544 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 PNPLA1Q8N8W4 532 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 C3orf58Q8NDZ4 430 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 APPL2Q8NEU8 664 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 LARP4BQ92615 738 aaKnown RBP11.12□□□□□ -0.63
HOXD3-203ENST00000432796 CNOT6LQ96LI5 555 aaKnown RBP11.12□□□□□ -0.63
HOXD3-203ENST00000432796 GTPBP2Q9BX10 602 aaKnown RBP11.12□□□□□ -0.63
HOXD3-203ENST00000432796 CLMPQ9H6B4 373 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 FBRSL1Q9HCM7 1045 aaKnown RBP11.12□□□□□ -0.63
HOXD3-203ENST00000432796 POLD4Q9HCU8 107 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 FBXL5Q9UKA1 691 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 YIPF1Q9Y548 306 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 CITO14578 2027 aa11.12□□□□□ -0.63
HOXD3-203ENST00000432796 PDCD11Q14690 1871 aaKnown RBP11.12□□□□□ -0.63
HOXD3-203ENST00000432796 SMIM28A0A1B0GU29 152 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 CAPN8A6NHC0 703 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 SFI1A8K8P3 1242 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 CFIP05156 583 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 MAPTP10636 758 aaKnown RBP11.11□□□□□ -0.63
HOXD3-203ENST00000432796 PDIA4P13667 645 aaKnown RBP11.11□□□□□ -0.63
HOXD3-203ENST00000432796 WEE1P30291 646 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 PTGER3P43115 390 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 SLC12A3P55017 1021 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 GFPT1Q06210 699 aaPredicted RBP11.11□□□□□ -0.63
HOXD3-203ENST00000432796 PLD1Q13393 1074 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 RUNX3Q13761 415 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 MRPL58Q14197 206 aaKnown RBP11.11□□□□□ -0.63
HOXD3-203ENST00000432796 PEAR1Q5VY43 1037 aaPredicted RBP11.11□□□□□ -0.63
HOXD3-203ENST00000432796 ANO7Q6IWH7 933 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 ZNF280DQ6N043 979 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 HSCBQ8IWL3 235 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 EXOC4Q96A65 974 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 PNMA5Q96PV4 448 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 PPP1R10Q96QC0 940 aaKnown RBP11.11□□□□□ -0.63
HOXD3-203ENST00000432796 TSPAN18Q96SJ8 248 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 FAM83CQ9BQN1 747 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 MMTAG2Q9BU76 263 aaKnown RBP11.11□□□□□ -0.63
HOXD3-203ENST00000432796 ZSCAN16Q9H4T2 348 aaPredicted RBP11.11□□□□□ -0.63
HOXD3-203ENST00000432796 RPF1Q9H9Y2 349 aaKnown RBP11.11□□□□□ -0.63
HOXD3-203ENST00000432796 PLEKHA5Q9HAU0 1116 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 HPS4Q9NQG7 708 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 CNTN3Q9P232 1028 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 STK17AQ9UEE5 414 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 SLC6A14Q9UN76 642 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 EXOC7Q9UPT5 735 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 APOBEC2Q9Y235 224 aaKnown RBP11.11□□□□□ -0.63
HOXD3-203ENST00000432796 USP20Q9Y2K6 914 aa11.11□□□□□ -0.63
HOXD3-203ENST00000432796 URB1O60287 2271 aaKnown RBP11.1□□□□□ -0.63
HOXD3-203ENST00000432796 OTOL1A6NHN0 477 aaPredicted RBP11.1□□□□□ -0.63
HOXD3-203ENST00000432796 TTLL13PA6NNM8 815 aa11.1□□□□□ -0.63
HOXD3-203ENST00000432796 TULP1O00294 542 aaPredicted RBP11.1□□□□□ -0.63
HOXD3-203ENST00000432796 CAPN9O14815 690 aa11.1□□□□□ -0.63
HOXD3-203ENST00000432796 TRAK2O60296 914 aa11.1□□□□□ -0.63
HOXD3-203ENST00000432796 CD2BP2O95400 341 aaKnown RBP11.1□□□□□ -0.63
HOXD3-203ENST00000432796 CLTAP09496 248 aa11.1□□□□□ -0.63
HOXD3-203ENST00000432796 KCNE1P15382 129 aa11.1□□□□□ -0.63
HOXD3-203ENST00000432796 PLCG1P19174 1290 aa11.1□□□□□ -0.63
HOXD3-203ENST00000432796 GALK1P51570 392 aa11.1□□□□□ -0.63
HOXD3-203ENST00000432796 NCKAP1LP55160 1127 aa11.1□□□□□ -0.63
HOXD3-203ENST00000432796 SLC14A1Q13336 389 aa11.1□□□□□ -0.63
HOXD3-203ENST00000432796 IL17AQ16552 155 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms