RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 GOLGA8TH3BQL2 631 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 PMPCBO75439 489 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 BANF1O75531 89 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 CPB1P15086 417 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 ITIH2P19823 946 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 EEF1B2P24534 225 aaKnown RBP9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 RPL21P46778 160 aaKnown RBP9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 GLRBP48167 497 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 SLC12A3P55017 1021 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 COPS2P61201 443 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 PGM5Q15124 567 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 CCL15Q16663 113 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 GOLGA7BQ2TAP0 167 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 ENOSF1Q7L5Y1 443 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 TRPM8Q7Z2W7 1104 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 PALB2Q86YC2 1186 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 TMEM139Q8IV31 216 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 HSD3B7Q9H2F3 369 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 AGO4Q9HCK5 861 aaKnown RBP9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 PXMP2Q9NR77 195 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 USP15Q9Y4E8 981 aaPredicted RBP9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 V9GYQ6 96 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 NUP98P52948 1817 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 DLEC1Q9Y238 1755 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 SHBGP04278 402 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 CSE1LP55060 971 aaKnown RBP9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 RBP5P82980 135 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 ATG16L1Q676U5 607 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 ANGPTL8Q6UXH0 198 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 CCDC60Q8IWA6 550 aaPredicted RBP9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 ELOA2Q8IYF1 753 aaPredicted RBP9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 GMCL1Q96IK5 515 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 NT5C1AQ9BXI3 368 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 SMARCAD1Q9H4L7 1026 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 PTPRHQ9HD43 1115 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 SETD4Q9NVD3 440 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 HAO1Q9UJM8 370 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 STAP1Q9ULZ2 295 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 SYNDIG1LA6NDD5 238 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 FAM47DPA6NHR8 397 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 USP12O75317 370 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 FAM107AO95990 144 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 GRIK1P39086 918 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 STX1BP61266 288 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 PLCB4Q15147 1175 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 ARSHQ5FYA8 562 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 RCOR2Q8IZ40 523 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 IPMKQ8NFU5 416 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.53□□□□□ -0.884e-22■□□□□ 10.7
SMARCA1-202ENST00000371122 RFWD2Q8NHY2 731 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 ZNF606Q8WXB4 792 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 P2RX7Q99572 595 aaKnown RBP9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 PDGFDQ9GZP0 370 aaPredicted RBP9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 IL1RL2Q9HB29 575 aa9.53□□□□□ -0.88
SMARCA1-202ENST00000371122 DCTN3O75935 186 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 B3GAT3O94766 335 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 AGTP01019 485 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 NCAM1P13591 858 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 TPI1P60174 286 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 PRAMEP78395 509 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 TNFAIP2Q03169 654 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 CUL3Q13618 768 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 TMEM119Q4V9L6 283 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 MFSD7Q6UXD7 560 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 MIB1Q86YT6 1006 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 SCUBE3Q8IX30 993 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 RMDN1Q96DB5 314 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 TSSK1BQ9BXA7 367 aa9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 ASTN2O75129 1339 aaPredicted RBP9.52□□□□□ -0.88
SMARCA1-202ENST00000371122 LOC102724159A0A0B4J2E5 919 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 AIM2O14862 343 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 ADRB2P07550 413 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 ENO3P13929 434 aaPredicted RBP9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 HNRNPH1P31943 449 aaKnown RBP9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 FLT3P36888 993 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 STAT4Q14765 748 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 PWP2Q15269 919 aaKnown RBP9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 KLHL38Q2WGJ6 581 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 FIGNQ5HY92 759 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 TRIM72Q6ZMU5 477 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 NT5DC3Q86UY8 548 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 RASSF3Q86WH2 238 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 EFHBQ8N7U6 833 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 C4orf32Q8N8J7 132 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 PARD3BQ8TEW8 1205 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 ZNF669Q96BR6 464 aaPredicted RBP9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 TRIM56Q9BRZ2 755 aaKnown RBP9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 ATXN3LQ9H3M9 355 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 A1CFQ9NQ94 594 aaKnown RBP9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 ENO4A6NNW6 628 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 MAP3K7O43318 606 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 XPAP23025 273 aaPredicted RBP9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 ANXA13P27216 316 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 PGM1P36871 562 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 AVPR1AP37288 418 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 CYP24A1Q07973 514 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 MXD4Q14582 209 aaPredicted RBP9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 UGCGQ16739 394 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 DCAF4L1Q3SXM0 396 aa9.52□□□□□ -0.89
SMARCA1-202ENST00000371122 ACCSLQ4AC99 568 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms