RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 ABI2Q9NYB9 513 aaPredicted RBP19.06■□□□□ 0.64
HDDC3-201ENST00000330334 CACNA1IQ9P0X4 2223 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 PTPRJQ12913 1337 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 TULP1O00294 542 aaPredicted RBP19.05■□□□□ 0.64
HDDC3-201ENST00000330334 CMA1P23946 247 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 CUL4BQ13620 913 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 PSMD6Q15008 389 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 KNOP1Q1ED39 458 aaKnown RBP19.05■□□□□ 0.64
HDDC3-201ENST00000330334 CFAP221Q4G0U5 840 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 INTS6LQ5JSJ4 861 aaKnown RBP19.05■□□□□ 0.64
HDDC3-201ENST00000330334 STXBP5Q5T5C0 1151 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 GPR158Q5T848 1215 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 ZC3H14Q6PJT7 736 aaKnown RBP19.05■□□□□ 0.64
HDDC3-201ENST00000330334 CEP57L1Q8IYX8 460 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 XXYLT1Q8NBI6 393 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 RSPRY1Q96DX4 576 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 FUBP3Q96I24 572 aaKnown RBP eCLIP19.05■□□□□ 0.64
HDDC3-201ENST00000330334 GCNAQ96QF7 691 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 BLZF1Q9H2G9 400 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 USP25Q9UHP3 1055 aa19.05■□□□□ 0.64
HDDC3-201ENST00000330334 NCANO14594 1321 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 MYL1P05976 194 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 CSH1P0DML2 217 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 CSH2P0DML3 217 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 HMGA1P17096 107 aaKnown RBP19.04■□□□□ 0.64
HDDC3-201ENST00000330334 DDX6P26196 483 aaKnown RBP eCLIP19.04■□□□□ 0.64
HDDC3-201ENST00000330334 AFMP43652 599 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 RPL10AP62906 217 aaKnown RBP19.04■□□□□ 0.64
HDDC3-201ENST00000330334 FAM171BQ6P995 826 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 TRAPPC11Q7Z392 1133 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 YAF2Q8IY57 180 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 ADGRF2Q8IZF7 708 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 GOLGA5Q8TBA6 731 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 GIPC2Q8TF65 315 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 MYRFLQ96LU7 910 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 IER2Q9BTL4 223 aa19.04■□□□□ 0.64
HDDC3-201ENST00000330334 SPATA6Q9NWH7 488 aaPredicted RBP19.04■□□□□ 0.64
HDDC3-201ENST00000330334 DPYSL4O14531 572 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 LAMTOR5O43504 91 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 ACTN4O43707 911 aaKnown RBP19.03■□□□□ 0.64
HDDC3-201ENST00000330334 F11P03951 625 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 CASP1P29466 404 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 NLRP12P59046 1061 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 PLCB2Q00722 1185 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 CYP24A1Q07973 514 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 PSMD2Q13200 908 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 ARHGAP29Q52LW3 1261 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 LMBRD2Q68DH5 695 aaPredicted RBP19.03■□□□□ 0.64
HDDC3-201ENST00000330334 TMEM150AQ86TG1 271 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 OSTM1Q86WC4 334 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 SPRYD3Q8NCJ5 442 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 FAM3CQ92520 227 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 PAGE5Q96GU1 130 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 FAM84AQ96KN4 292 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 CEP295NLQ96MC4 621 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 LRRC3BQ96PB8 259 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 FNBP1Q96RU3 617 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 PI4K2AQ9BTU6 479 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 SLC46A2Q9BY10 475 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 C8orf33Q9H7E9 229 aaPredicted RBP19.03■□□□□ 0.64
HDDC3-201ENST00000330334 SLC39A2Q9NP94 309 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 GTF3C4Q9UKN8 822 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 PIAS3Q9Y6X2 628 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 GVINP1Q7Z2Y8 2422 aa19.03■□□□□ 0.64
HDDC3-201ENST00000330334 CLIC2O15247 247 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 KLRC4O43908 158 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 MAGEA11P43364 429 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 KRT85P78386 507 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 MAPRE1Q15691 268 aaKnown RBP19.02■□□□□ 0.64
HDDC3-201ENST00000330334 NELFCDQ8IXH7 590 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 CMTM8Q8IZV2 173 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 CELF5Q8N6W0 485 aaKnown RBP19.02■□□□□ 0.64
HDDC3-201ENST00000330334 RDH13Q8NBN7 331 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 CSGALNACT1Q8TDX6 532 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 KBTBD7Q8WVZ9 684 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 TRMT2BQ96GJ1 504 aaKnown RBP19.02■□□□□ 0.64
HDDC3-201ENST00000330334 CGRRF1Q99675 332 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 UXTQ9UBK9 157 aaPredicted RBP19.02■□□□□ 0.64
HDDC3-201ENST00000330334 SERTAD1Q9UHV2 236 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 CDH9Q9ULB4 789 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 HPSEQ9Y251 543 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 ZDHHC9Q9Y397 364 aa19.02■□□□□ 0.64
HDDC3-201ENST00000330334 TCHHQ07283 1943 aa19.02■□□□□ 0.63
HDDC3-201ENST00000330334 ZNF292O60281 2723 aa19.02■□□□□ 0.63
HDDC3-201ENST00000330334 FAM237AA0A1B0GTK4 181 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 TACC1O75410 805 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 NOL4O94818 638 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 STAU1O95793 577 aaKnown RBP19.01■□□□□ 0.63
HDDC3-201ENST00000330334 CST3P01034 146 aaPredicted RBP19.01■□□□□ 0.63
HDDC3-201ENST00000330334 LMNAP02545 664 aaKnown RBP19.01■□□□□ 0.63
HDDC3-201ENST00000330334 DLATP10515 647 aaKnown RBP19.01■□□□□ 0.63
HDDC3-201ENST00000330334 TNNI1P19237 187 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 WARSP23381 471 aaKnown RBP19.01■□□□□ 0.63
HDDC3-201ENST00000330334 ACAT1P24752 427 aaKnown RBP19.01■□□□□ 0.63
HDDC3-201ENST00000330334 CYP2F1P24903 491 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 CYP2J2P51589 502 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 C4orf50Q6ZRC1 276 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 SPATA2LQ8IUW3 424 aaPredicted RBP19.01■□□□□ 0.63
HDDC3-201ENST00000330334 SLC9A9Q8IVB4 645 aa19.01■□□□□ 0.63
HDDC3-201ENST00000330334 BPIFB1Q8TDL5 484 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms