RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 POU4F1Q01851 419 aa17.48■□□□□ 0.39
TSPAN3-201ENST00000267970 TAP1Q03518 808 aa17.48■□□□□ 0.39
TSPAN3-201ENST00000267970 GPR141Q7Z602 305 aa17.48■□□□□ 0.39
TSPAN3-201ENST00000267970 GFM2Q969S9 779 aaKnown RBP17.48■□□□□ 0.39
TSPAN3-201ENST00000267970 DMAP1Q9NPF5 467 aaPredicted RBP17.48■□□□□ 0.39
TSPAN3-201ENST00000267970 ANKARQ7Z5J8 1434 aa17.48■□□□□ 0.39
TSPAN3-201ENST00000267970 SUPT7LO94864 414 aa17.48■□□□□ 0.39
TSPAN3-201ENST00000267970 DDI2Q5TDH0 399 aa17.48■□□□□ 0.39
TSPAN3-201ENST00000267970 DDHD1Q8NEL9 900 aa17.48■□□□□ 0.39
TSPAN3-201ENST00000267970 TMEM2Q9UHN6 1383 aa17.48■□□□□ 0.39
TSPAN3-201ENST00000267970 A0A1B0GW55 424 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 POLBP06746 335 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 DUX4L2P0CJ85 424 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 DUX4L3P0CJ86 424 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 DUX4L4P0CJ87 422 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 DUX4L5P0CJ88 424 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 DUX4L6P0CJ89 424 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 DUX4L7P0CJ90 424 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 GEMIN4P57678 1058 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 OASLQ15646 514 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 MAGEB10Q96LZ2 347 aaPredicted RBP17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 KIF2CQ99661 725 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 CHST12Q9NRB3 414 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 DUX4Q9UBX2 424 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 PDXKO00764 312 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 NPTXRO95502 500 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 NCALDP61601 193 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 BAATQ14032 418 aaPredicted RBP17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 MTDHQ86UE4 582 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 PRCCQ92733 491 aaPredicted RBP17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 ZNF512Q96ME7 567 aaPredicted RBP17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 ACAD9Q9H845 621 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 INTS13Q9NVM9 706 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 NR5A2O00482 541 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 NQO1P15559 274 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 CDH2P19022 906 aaPredicted RBP17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 C11orf63Q6NUN7 778 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 ERP44Q9BS26 406 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 TCHHL1Q5QJ38 904 aaPredicted RBP17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 DDX18Q9NVP1 670 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 ERVK-7P63135 1459 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 SAC3D1A6NKF1 404 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 MLNP12872 115 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 RAD51Q06609 339 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 YAF2Q8IY57 180 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 CEP41Q9BYV8 373 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 IMPAD1Q9NX62 359 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 FAM153AQ9UHL3 310 aa17.47■□□□□ 0.39
TSPAN3-201ENST00000267970 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 TAF5Q15542 800 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 ENOSF1Q7L5Y1 443 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 TNIP3Q96KP6 325 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 UBAP1Q9NZ09 502 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 UBP1Q9NZI7 540 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 SPRP35270 261 aaPredicted RBP17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 SARSP49591 514 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 DNAJC7Q99615 494 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 PHF20Q9BVI0 1012 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 ZNF682O95780 498 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 FEN1P39748 380 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 SCTRP47872 440 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 CORO7P57737 925 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 FOXO4P98177 505 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 FOPNLQ96NB1 174 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 DDX5P17844 614 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 FGFR2P21802 821 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 NFIL3Q16649 462 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 CLEC16AQ2KHT3 1053 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 WLSQ5T9L3 541 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 POP1Q99575 1024 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 KDM5DQ9BY66 1539 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 CLASP2O75122 1294 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 CAPN1P07384 714 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 EPHA7Q15375 998 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 POTEAQ6S8J7 498 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 SAPCD2Q86UD0 394 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 IARS2Q9NSE4 1012 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 BLOC1S6Q9UL45 172 aa17.46■□□□□ 0.39
TSPAN3-201ENST00000267970 CYP27B1O15528 508 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 FAM107AO95990 144 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 RBP3P10745 1247 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 BGNP21810 368 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 TMEM237Q96Q45 408 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 ISCUQ9H1K1 167 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 STRNO43815 780 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 ARL4DP49703 201 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 LAMB3Q13751 1172 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 ARHGEF7Q14155 803 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 VEPH1Q14D04 833 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 FBXO36Q8NEA4 188 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 TSPAN17Q96FV3 270 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 FAM84BQ96KN1 310 aaPredicted RBP17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 DOLKQ9UPQ8 538 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 DYNC1LI2O43237 492 aaPredicted RBP17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 CHRNA5P30532 468 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 CHI3L1P36222 383 aaPredicted RBP17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 ATP12AP54707 1039 aa17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 PIGHQ14442 188 aaPredicted RBP17.45■□□□□ 0.38
TSPAN3-201ENST00000267970 GRID1Q9ULK0 1009 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms