RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 RPS7P62081 194 aaKnown RBP5.42□□□□□ -1.54
CCDC54-201ENST00000261058 BTKQ06187 659 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 IQCB1Q15051 598 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 FAM209BQ5JX69 171 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 MIIPQ5JXC2 388 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 ADGRG5Q8IZF4 528 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 SLC25A43Q8WUT9 341 aaPredicted RBP5.42□□□□□ -1.54
CCDC54-201ENST00000261058 SPSB4Q96A44 273 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 OSBPL9Q96SU4 736 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 DHX36Q9H2U1 1008 aaKnown RBP5.42□□□□□ -1.54
CCDC54-201ENST00000261058 GPRC5BQ9NZH0 403 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 CAPN11Q9UMQ6 739 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 FZD1Q9UP38 647 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 DMTF1Q9Y222 760 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 RAD54BQ9Y620 910 aa5.42□□□□□ -1.54
CCDC54-201ENST00000261058 MYO1CO00159 1063 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 CCP110O43303 1012 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 VPS4BO75351 444 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 CDKL5O76039 1030 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 SETSIPP0DME0 302 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 FGFR2P21802 821 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 DDX6P26196 483 aaKnown RBP eCLIP5.41□□□□□ -1.54
CCDC54-201ENST00000261058 KRT72Q14CN4 511 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 GEN1Q17RS7 908 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 ZDHHC24Q6UX98 284 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 CATSPERGQ6ZRH7 1159 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 MICALCLQ6ZW33 695 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 UNC13DQ70J99 1090 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 LIX1LQ8IVB5 337 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 VGLL2Q8N8G2 317 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 CPEB3Q8NE35 698 aaKnown RBP5.41□□□□□ -1.54
CCDC54-201ENST00000261058 GDF15Q99988 308 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 MS4A7Q9GZW8 240 aaPredicted RBP5.41□□□□□ -1.54
CCDC54-201ENST00000261058 UNKLQ9H9P5 680 aaKnown RBP5.41□□□□□ -1.54
CCDC54-201ENST00000261058 GALNT9Q9HCQ5 603 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 MAP3K2Q9Y2U5 619 aa5.41□□□□□ -1.54
CCDC54-201ENST00000261058 APOL1O14791 398 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 AREL1O15033 823 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 PPFIA4O75335 1185 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 LDHAP00338 332 aaKnown RBP5.4□□□□□ -1.54
CCDC54-201ENST00000261058 A1BGP04217 495 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 LAG3P18627 525 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 CARSP49589 748 aaKnown RBP5.4□□□□□ -1.54
CCDC54-201ENST00000261058 RESTQ13127 1097 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 PMS2P11Q13670 270 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 NPY5RQ15761 445 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 ZIK1Q3SY52 487 aaPredicted RBP5.4□□□□□ -1.54
CCDC54-201ENST00000261058 KLHDC7AQ5VTJ3 777 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 FCRL6Q6DN72 434 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 SLC30A10Q6XR72 485 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 ARHGEF19Q8IW93 802 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 FAM9AQ8IZU1 332 aaPredicted RBP5.4□□□□□ -1.54
CCDC54-201ENST00000261058 MPP5Q8N3R9 675 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 SDR16C5Q8N3Y7 309 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 KIAA1191Q96A73 305 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 IQCDQ96DY2 449 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 ALOXE3Q9BYJ1 711 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 TTYH3Q9C0H2 523 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 PLCB1Q9NQ66 1216 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 SHOC2Q9UQ13 582 aa5.4□□□□□ -1.54
CCDC54-201ENST00000261058 MTO1Q9Y2Z2 717 aaKnown RBP5.4□□□□□ -1.54
CCDC54-201ENST00000261058 A0A087WZ62 844 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 TOR1BO14657 336 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 SPDEFO95238 335 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 NDUFA10O95299 355 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 CHRM3P20309 590 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 GATA3P23771 443 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 PPIFP30405 207 aaKnown RBP5.4□□□□□ -1.55
CCDC54-201ENST00000261058 IL6STP40189 918 aaPredicted RBP5.4□□□□□ -1.55
CCDC54-201ENST00000261058 NDUFV1P49821 464 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 LILRA4P59901 499 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 KRTAP10-2P60368 255 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 OS9Q13438 667 aaPredicted RBP5.4□□□□□ -1.55
CCDC54-201ENST00000261058 SLC35G1Q2M3R5 365 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 NRN1LQ496H8 165 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 PLA1AQ53H76 456 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 FNDC7Q5VTL7 733 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 ZNF280BQ86YH2 543 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 ZNF384Q8TF68 577 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 PTDSS2Q9BVG9 487 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 CERS4Q9HA82 394 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 DNMT3BQ9UBC3 853 aaKnown RBP5.4□□□□□ -1.55
CCDC54-201ENST00000261058 MID2Q9UJV3 735 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 DAAM1Q9Y4D1 1078 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 NOX1Q9Y5S8 564 aa5.4□□□□□ -1.55
CCDC54-201ENST00000261058 CENPVL1A0A0U1RR11 272 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 LOC102723971A0A1B0GUV8 181 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 THAP12O43422 761 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 KCNQ3O43525 872 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 BTF3P20290 206 aaKnown RBP5.39□□□□□ -1.55
CCDC54-201ENST00000261058 ITGALP20701 1170 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 ACVR2AP27037 513 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 IL1R2P27930 398 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 LRPAP1P30533 357 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 NPTX2P47972 431 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 PXNP49023 591 aaPredicted RBP5.39□□□□□ -1.55
CCDC54-201ENST00000261058 FOXE3Q13461 319 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 SPDYE7PQ495Y7 208 aa5.39□□□□□ -1.55
CCDC54-201ENST00000261058 CD300EQ496F6 205 aaPredicted RBP5.39□□□□□ -1.55
CCDC54-201ENST00000261058 TMEM108Q6UXF1 575 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms