RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 HPSEQ9Y251 543 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 ACTL7BQ9Y614 415 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 TLR2O60603 784 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 IFNEQ86WN2 208 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 KATNA1O75449 491 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 TCN1P20061 433 aaPredicted RBP8.55□□□□□ -1.04
APOB-201ENST00000233242 NCF4Q15080 339 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 THEM5Q8N1Q8 247 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 ZNF398Q8TD17 642 aa8.55□□□□□ -1.04
APOB-201ENST00000233242 IGKV5-2P06315 115 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 ABI1Q8IZP0 508 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 NEDD1Q8NHV4 660 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 TMEM8AQ9HCN3 771 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 TIMMDC1Q9NPL8 285 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 DAPK2Q9UIK4 370 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 ARIH1Q9Y4X5 557 aaPredicted RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 KRT87PA6NCN2 255 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 GSG1L2A8MUP6 293 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 CAPN1P07384 714 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 GLI1P08151 1106 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 ASNSP08243 561 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 MLH1P40692 756 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 RECQLP46063 649 aaPredicted RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 FXR2P51116 673 aaKnown RBP eCLIP8.54□□□□□ -1.04
APOB-201ENST00000233242 EPS8Q12929 822 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 THNSL1Q8IYQ7 743 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 POP5Q969H6 163 aaKnown RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 CLEC4MQ9H2X3 399 aaPredicted RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 GDF3Q9NR23 364 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 KLHL3Q9UH77 587 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 SUGT1Q9Y2Z0 365 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 PNPLA6Q8IY17 1366 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 USP17L15C9J2P7 530 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 USP17L13C9JLJ4 530 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 USP17L11C9JVI0 530 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 USP17L18D6R9N7 530 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 USP17L22D6RA61 530 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 USP17L17D6RBQ6 530 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 USP17L19D6RCP7 530 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 USP17L20D6RJB6 530 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 H7C0S8 307 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 ATP6V1C1P21283 382 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 UBE3AQ05086 875 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 USP17L24Q0WX57 530 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 ZNF568Q3ZCX4 644 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 USP17L6PQ6QN14 398 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 SZRD1Q7Z422 152 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 TMEM79Q9BSE2 394 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 CROCC2H7BZ55 1655 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 RALAP11233 206 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 SNRNP35Q16560 246 aaKnown RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 NSUN6Q8TEA1 469 aaKnown RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 ZNF560Q96MR9 790 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 ECSITQ9BQ95 431 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 POLR3FQ9H1D9 316 aaPredicted RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 METTL5Q9NRN9 209 aaKnown RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 SDR42E2A6NKP2 422 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 AQP5P55064 265 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 OXNAD1Q96HP4 312 aaPredicted RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 TNIP3Q96KP6 325 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 H2AFY2Q9P0M6 372 aaPredicted RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 SASH3O75995 380 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 RIPK1Q13546 671 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 KLHL12Q53G59 568 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 C9orf16Q9BUW7 83 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 VTI1BQ9UEU0 232 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 PRG3Q9Y2Y8 225 aaPredicted RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 OVOS2A0A0G2JMS6 1433 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 ITGA1P56199 1179 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 RMDN3Q96TC7 470 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 PRRG3Q9BZD7 231 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 LOC102724428A0A0B4J2F2 783 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 GTF2H1P32780 548 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 SIK1P57059 783 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 TBC1D10BQ4KMP7 808 aaPredicted RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 AGAP9Q5VTM2 703 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 RSBN1Q5VWQ0 802 aaPredicted RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 STKLD1Q8NE28 680 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 C19orf18Q8NEA5 215 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 NBPF26B4DH59 902 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 CNOT3O75175 753 aaKnown RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 TKTP29401 623 aaKnown RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 TALDO1P37837 337 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 RGS21Q2M5E4 152 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 ZNF394Q53GI3 561 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 CDH24Q86UP0 819 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 NBPF15Q8N660 670 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 PAIP1Q9H074 479 aaKnown RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 RBP3P10745 1247 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 CACHD1Q5VU97 1274 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 TMCO1Q9UM00 188 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 HEATR9A2RTY3 570 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 TRIM25Q14258 630 aaKnown RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 SPOUT1Q5T280 376 aaKnown RBP8.54□□□□□ -1.04
APOB-201ENST00000233242 ANKS3Q6ZW76 656 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 USE1Q9NZ43 259 aa8.54□□□□□ -1.04
APOB-201ENST00000233242 TCP10L2B9ZVM9 353 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 SORBS3O60504 671 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 IFNA14P01570 189 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms