RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 TRPV6Q9H1D0 765 aa17.43■□□□□ 0.38
SCARB2-210ENST00000638567 PCDHA3Q9Y5H8 950 aa17.43■□□□□ 0.38
SCARB2-210ENST00000638567 NEMP1O14524 444 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 PAMP19021 973 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 RFC5P40937 340 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 PPP3CAQ08209 521 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 CHI3L2Q15782 390 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 FASTKD1Q53R41 847 aaKnown RBP17.42■□□□□ 0.38
SCARB2-210ENST00000638567 XRRA1Q6P2D8 792 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 IRF2BP2Q7Z5L9 587 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 LNX1Q8TBB1 728 aaPredicted RBP17.42■□□□□ 0.38
SCARB2-210ENST00000638567 ANGPTL3Q9Y5C1 460 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 SLC4A7Q9Y6M7 1214 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 SMAPO00193 183 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 ATP6V1G2O95670 118 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 KCNA3P22001 575 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 TMEM132DQ14C87 1099 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 C4orf19Q8IY42 314 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 ACTL9Q8TC94 416 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 CHST7Q9NS84 486 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 DLGAP2Q9P1A6 1054 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 SLC12A6Q9UHW9 1150 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 USP20Q9Y2K6 914 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 L3MBTL1Q9Y468 752 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 PEAK1Q9H792 1746 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 GNGT2O14610 69 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 GHRP10912 638 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 ARPP19P56211 112 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 DEUP1Q05D60 604 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 PCNX4Q63HM2 1172 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 ASTN1O14525 1302 aa17.42■□□□□ 0.38
SCARB2-210ENST00000638567 TLR2O60603 784 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 PDGFRBP09619 1106 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 C1orf186Q6ZWK4 172 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 LCA5Q86VQ0 697 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 APOBEC3FQ8IUX4 373 aaKnown RBP17.41■□□□□ 0.38
SCARB2-210ENST00000638567 FGFBP2Q9BYJ0 223 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 DCLK3Q9C098 648 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 DRC3Q9H069 523 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 MEIS2O14770 477 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 GPD1P21695 349 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 SERPINB9P50453 376 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 DLG4P78352 724 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 SYTL5Q8TDW5 730 aaPredicted RBP17.41■□□□□ 0.38
SCARB2-210ENST00000638567 PDCD2LQ9BRP1 358 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 PPP1R12AO14974 1030 aaPredicted RBP17.41■□□□□ 0.38
SCARB2-210ENST00000638567 PRPF39Q86UA1 669 aaKnown RBP17.41■□□□□ 0.38
SCARB2-210ENST00000638567 PARD3BQ8TEW8 1205 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 STAMBPL1Q96FJ0 436 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 CCDC138Q96M89 665 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 PAFAH2Q99487 392 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 NT5C1AQ9BXI3 368 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 KCTD10Q9H3F6 313 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 RXFP1Q9HBX9 757 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 STIP1P31948 543 aaKnown RBP17.41■□□□□ 0.38
SCARB2-210ENST00000638567 MARCKSL1P49006 195 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 RCN1Q15293 331 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 ITPRIPL1Q6GPH6 555 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 APTXQ7Z2E3 356 aaKnown RBP17.41■□□□□ 0.38
SCARB2-210ENST00000638567 EMC1Q8N766 993 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 SCG3Q8WXD2 468 aaKnown RBP17.41■□□□□ 0.38
SCARB2-210ENST00000638567 SLC10A4Q96EP9 437 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 SHCBP1LQ9BZQ2 653 aa17.41■□□□□ 0.38
SCARB2-210ENST00000638567 AGO4Q9HCK5 861 aaKnown RBP17.41■□□□□ 0.38
SCARB2-210ENST00000638567 TMED1Q13445 227 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 MED21Q13503 144 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 TTC39BQ5VTQ0 682 aaPredicted RBP17.4■□□□□ 0.38
SCARB2-210ENST00000638567 SPOCD1Q6ZMY3 1216 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 MTDHQ86UE4 582 aaKnown RBP17.4■□□□□ 0.38
SCARB2-210ENST00000638567 EPS8L1Q8TE68 723 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 MMP19Q99542 508 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 CACNA1FO60840 1977 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 PPATQ06203 517 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 TRIP10Q15642 601 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 SUGP1Q8IWZ8 645 aaKnown RBP17.4■□□□□ 0.38
SCARB2-210ENST00000638567 SALL4Q9UJQ4 1053 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 NPY5RQ15761 445 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 COBLL1Q53SF7 1204 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 HABP4Q5JVS0 413 aaKnown RBP17.4■□□□□ 0.38
SCARB2-210ENST00000638567 HGSNATQ68CP4 663 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 OR6P1Q8NGX9 317 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 SCFD2Q8WU76 684 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 NINJ2Q9NZG7 142 aa17.4■□□□□ 0.38
SCARB2-210ENST00000638567 OGTO15294 1046 aa17.39■□□□□ 0.38
SCARB2-210ENST00000638567 ZBTB7AO95365 584 aa17.39■□□□□ 0.38
SCARB2-210ENST00000638567 PAPOLAP51003 745 aaKnown RBP17.39■□□□□ 0.38
SCARB2-210ENST00000638567 MRPS35P82673 323 aaKnown RBP17.39■□□□□ 0.38
SCARB2-210ENST00000638567 MCL1Q07820 350 aa17.39■□□□□ 0.38
SCARB2-210ENST00000638567 IER5Q5VY09 327 aa17.39■□□□□ 0.38
SCARB2-210ENST00000638567 ABRAQ8N0Z2 381 aa17.39■□□□□ 0.38
SCARB2-210ENST00000638567 GAKO14976 1311 aa17.39■□□□□ 0.37
SCARB2-210ENST00000638567 S100BP04271 92 aaPredicted RBP17.39■□□□□ 0.37
SCARB2-210ENST00000638567 ITGB3P05106 788 aa17.39■□□□□ 0.37
SCARB2-210ENST00000638567 SERPINB4P48594 390 aa17.39■□□□□ 0.37
SCARB2-210ENST00000638567 STILQ15468 1287 aa17.39■□□□□ 0.37
SCARB2-210ENST00000638567 TEX2Q8IWB9 1127 aa17.39■□□□□ 0.37
SCARB2-210ENST00000638567 DEFB129Q9H1M3 183 aa17.39■□□□□ 0.37
SCARB2-210ENST00000638567 CTNNAL1Q9UBT7 734 aa17.39■□□□□ 0.37
SCARB2-210ENST00000638567 RNF103-CHMP3A0A140T963 221 aa17.39■□□□□ 0.37
SCARB2-210ENST00000638567 SPDYE2BA6NHP3 402 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms