RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 RFPL2O75678 378 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 AFPP02771 609 aaKnown RBP21.72■■□□□ 1.07
PTCD3-220ENST00000627371 ACAT1P24752 427 aaKnown RBP21.72■■□□□ 1.07
PTCD3-220ENST00000627371 HOXA9P31269 272 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 ASPAP45381 313 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 KCNQ1P51787 676 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 ADCY1Q08828 1119 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 SMARCB1Q12824 385 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 INTS6LQ5JSJ4 861 aaKnown RBP21.72■■□□□ 1.07
PTCD3-220ENST00000627371 PTCRAQ6ISU1 281 aaPredicted RBP21.72■■□□□ 1.07
PTCD3-220ENST00000627371 SCARA5Q6ZMJ2 495 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 CREBRFQ8IUR6 639 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 TCEAL8Q8IYN2 117 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 DCP1BQ8IZD4 617 aaKnown RBP21.72■■□□□ 1.07
PTCD3-220ENST00000627371 SLC7A14Q8TBB6 771 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 FAXDC2Q96IV6 333 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 PGLYRP2Q96PD5 576 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 ASB2Q96Q27 587 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 NIF3L1Q9GZT8 377 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 SNX25Q9H3E2 840 aa21.72■■□□□ 1.07
PTCD3-220ENST00000627371 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.72■■□□□ 1.07
PTCD3-220ENST00000627371 MAGEC2Q9UBF1 373 aaPredicted RBP21.72■■□□□ 1.07
PTCD3-220ENST00000627371 MTMR11A4FU01 709 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 GRXCR2A6NFK2 248 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 HCRTO43612 131 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 VNN2O95498 520 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 ELF1P32519 619 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 MTIF2P46199 727 aaKnown RBP21.71■■□□□ 1.07
PTCD3-220ENST00000627371 RAP1GAPP47736 663 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 MYL5Q02045 173 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 CETN1Q12798 172 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 ANO6Q4KMQ2 910 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 SLC39A12Q504Y0 691 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 WDR44Q5JSH3 913 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 PPM1LQ5SGD2 360 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 CES5AQ6NT32 575 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 TMC5Q6UXY8 1006 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 LRRTM3Q86VH5 581 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 OR6B3Q8NGW1 331 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 SUSD6Q92537 303 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 BCO2Q9BYV7 579 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 RHOBTB2Q9BYZ6 727 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 NAT10Q9H0A0 1025 aaKnown RBP21.71■■□□□ 1.07
PTCD3-220ENST00000627371 SDCBP2Q9H190 292 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 CYP4F11Q9HBI6 524 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 SAMSN1Q9NSI8 373 aaKnown RBP21.71■■□□□ 1.07
PTCD3-220ENST00000627371 CDH9Q9ULB4 789 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 FAM50BQ9Y247 325 aa21.71■■□□□ 1.07
PTCD3-220ENST00000627371 USP15Q9Y4E8 981 aaPredicted RBP21.71■■□□□ 1.07
PTCD3-220ENST00000627371 CCDC195A0A1B0GUA6 201 aa21.7■■□□□ 1.06
PTCD3-220ENST00000627371 PRRG1O14668 218 aa21.7■■□□□ 1.06
PTCD3-220ENST00000627371 SEC24AO95486 1093 aa21.7■■□□□ 1.06
PTCD3-220ENST00000627371 HNRNPA1P09651 372 aaKnown RBP eCLIP21.7■■□□□ 1.06
PTCD3-220ENST00000627371 LMO2P25791 158 aa21.7■■□□□ 1.06
PTCD3-220ENST00000627371 GNL1P36915 607 aaPredicted RBP21.7■■□□□ 1.06
PTCD3-220ENST00000627371 CDH8P55286 799 aa21.7■■□□□ 1.06
PTCD3-220ENST00000627371 CYP26C1Q6V0L0 522 aa21.7■■□□□ 1.06
PTCD3-220ENST00000627371 GPR149Q86SP6 731 aa21.7■■□□□ 1.06
PTCD3-220ENST00000627371 C2orf15Q8WU43 125 aaKnown RBP21.7■■□□□ 1.06
PTCD3-220ENST00000627371 PKMYT1Q99640 499 aa21.7■■□□□ 1.06
PTCD3-220ENST00000627371 SYT15Q9BQS2 421 aa21.7■■□□□ 1.06
PTCD3-220ENST00000627371 CYP3A43Q9HB55 503 aa21.7■■□□□ 1.06
PTCD3-220ENST00000627371 HSFX1Q9UBD0 423 aa21.7■■□□□ 1.06
PTCD3-220ENST00000627371 NME7Q9Y5B8 376 aa21.7■■□□□ 1.06
PTCD3-220ENST00000627371 VCANP13611 3396 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 KCNJ18B7U540 433 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 POU2F2P09086 479 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 EEF1GP26641 437 aaKnown RBP21.69■■□□□ 1.06
PTCD3-220ENST00000627371 KCNJ12Q14500 433 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 SMAD2Q15796 467 aaKnown RBP21.69■■□□□ 1.06
PTCD3-220ENST00000627371 NFE2Q16621 373 aaPredicted RBP21.69■■□□□ 1.06
PTCD3-220ENST00000627371 MAN2A1Q16706 1144 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 ZSCAN23Q3MJ62 389 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 HSP90AA4PQ58FG1 418 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 CDKAL1Q5VV42 579 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 FEZF2Q8TBJ5 459 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 ZNF707Q96C28 371 aaPredicted RBP21.69■■□□□ 1.06
PTCD3-220ENST00000627371 BPIFA3Q9BQP9 254 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 PRKD2Q9BZL6 878 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 TMLHEQ9NVH6 421 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 INSL5Q9Y5Q6 135 aa21.69■■□□□ 1.06
PTCD3-220ENST00000627371 NOTCH4Q99466 2003 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 A8MXQ7 604 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 PDGFRBP09619 1106 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 IL9P15248 144 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 MTHFRP42898 656 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 PSMC1P62191 440 aaKnown RBP21.68■■□□□ 1.06
PTCD3-220ENST00000627371 INCA1Q0VD86 236 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 DUSP4Q13115 394 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 TCP11X2Q5H9J9 407 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 FAM171BQ6P995 826 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 ATAD1Q8NBU5 361 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 SPPL2BQ8TCT7 592 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 RIPOR3Q96MK2 946 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 NECTIN4Q96NY8 510 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 CRISPLD1Q9H336 500 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 CDH22Q9UJ99 828 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 GTF3C4Q9UKN8 822 aa21.68■■□□□ 1.06
PTCD3-220ENST00000627371 MYH10P35580 1976 aa21.67■■□□□ 1.06
PTCD3-220ENST00000627371 MYBPHLA2RUH7 354 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms