RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 FKBP3Q00688 224 aaKnown RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 PRAMEF18Q5VWM3 479 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 RETSATQ6NUM9 610 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 GALNT7Q86SF2 657 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 CARNMT1Q8N4J0 409 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 CCDC54Q8NEL0 328 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 SDR42E1Q8WUS8 393 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ZNF558Q96NG5 402 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 CDC42BPGQ6DT37 1551 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 PEX12O00623 359 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 CFIP05156 583 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 RHOXF2BP0C7M4 288 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 PLS3P13797 630 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 MSH3P20585 1137 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 WEE1P30291 646 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 CHRNB4P30926 498 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 FBXO42Q6P3S6 717 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 MTHFD1LQ6UB35 978 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 RASSF3Q86WH2 238 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 TAB3Q8N5C8 712 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 RHOXF2Q9BQY4 288 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 FBXO44Q9H4M3 255 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ZBTB5O15062 677 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 FAM200BP0CF97 657 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ZNF658Q5TYW1 1059 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 SWSAP1Q6NVH7 229 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 FAM192AQ9GZU8 254 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 DIABLOQ9NR28 239 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 MORC2Q9Y6X9 1032 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 TCOF1Q13428 1488 aaKnown RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 NDUFAB1O14561 156 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 CTNND1O60716 968 aaKnown RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 SERPINB10P48595 397 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 KCNQ4P56696 695 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 KRT31Q15323 416 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 PI16Q6UXB8 463 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 MPP5Q8N3R9 675 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ANKRD13CQ8N6S4 541 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 FAM161BQ96MY7 647 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 TUBGCP4Q9UGJ1 667 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 PLXNC1O60486 1568 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 PRKCBP05771 671 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 LCP1P13796 627 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 TNFRSF8P28908 595 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 CHI3L1P36222 383 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 GMPSP49915 693 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 IFT88Q13099 833 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 METTL3Q86U44 580 aaKnown RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 TSPAN14Q8NG11 270 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 THTPAQ9BU02 230 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 CYP4F11Q9HBI6 524 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ANLNQ9NQW6 1124 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 POLE4Q9NR33 117 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 PSME2Q9UL46 239 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 KERAO60938 352 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 MICAL2O94851 1124 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 RRM2P31350 389 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 HIBCHQ6NVY1 386 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 LRRC74BQ6ZQY2 392 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 LIX1Q8N485 282 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 VPS28Q9UK41 221 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 MGRN1O60291 552 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 MASP1P48740 699 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 WHAMMP3Q1A5X7 153 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ZRANB3Q5FWF4 1079 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 PGM2L1Q6PCE3 622 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 RNF149Q8NC42 400 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 CD274Q9NZQ7 290 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 GABBR1Q9UBS5 961 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 HEY1Q9Y5J3 304 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 STON1Q9Y6Q2 735 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 PIPSLA2A3N6 862 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 C9J4A7 227 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 STRNO43815 780 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 CYP19A1P11511 503 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 NCF2P19878 526 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ARHGDIBP52566 201 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 CDH13P55290 713 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ALDH6A1Q02252 535 aaKnown RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 FBXL19Q6PCT2 694 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 P4HA3Q7Z4N8 544 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 TMEM145Q8NBT3 493 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 USP7Q93009 1102 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 SERAC1Q96JX3 654 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 GLS2Q9UI32 602 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 SLC27A6Q9Y2P4 619 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 NEURL1BA8MQ27 555 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ADCY3O60266 1144 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 IGSF3O75054 1194 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 HIP1RO75146 1068 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ITGALP20701 1170 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 RASA1P20936 1047 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 DYNC1I2Q13409 638 aaKnown RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 VPS72Q15906 364 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 FAM182BQ5T319 152 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 PRPF39Q86UA1 669 aaKnown RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 LZTR1Q8N653 840 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 RSPH1Q8WYR4 309 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 CABS1Q96KC9 395 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 SIK3Q9Y2K2 1263 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms