RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 HOXA3O43365 443 aaPredicted RBP5.96□□□□□ -1.46
LINC00397-202ENST00000606785 TNFRSF6BO95407 300 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 FAM163BP0C2L3 166 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 XRCC6P12956 609 aaKnown RBP eCLIP5.96□□□□□ -1.46
LINC00397-202ENST00000606785 ACVR2AP27037 513 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 WNT3P56703 355 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 MESP2Q0VG99 397 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 TCF15Q12870 199 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 CNGB1Q14028 1251 aaPredicted RBP5.96□□□□□ -1.46
LINC00397-202ENST00000606785 SLC29A2Q14542 456 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 UBXN2BQ14CS0 331 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 TIGD6Q17RP2 521 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 BMT2Q1RMZ1 405 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 RNF151Q2KHN1 245 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 ARHGAP15Q53QZ3 475 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 FAM160B1Q5W0V3 765 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 ANKS6Q68DC2 871 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 ZDHHC24Q6UX98 284 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 MAATS1Q7Z4T9 603 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 KRT73Q86Y46 540 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 TMIEQ8NEW7 156 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 DNERQ8NFT8 737 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 CFHR4Q92496 578 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 KCNN1Q92952 543 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 MBD6Q96DN6 1003 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 BORCS6Q96GS4 357 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 EPC1Q9H2F5 836 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 CRYL1Q9Y2S2 319 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 SCINQ9Y6U3 715 aa5.96□□□□□ -1.46
LINC00397-202ENST00000606785 LOC102723971A0A1B0GUV8 181 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 CDHR4A6H8M9 788 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 TBKBP1A7MCY6 615 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 EYA2O00167 538 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 RAB27BO00194 218 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 RHOBTB3O94955 611 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 AGFG2O95081 481 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 CYP2C9P11712 490 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 EGR1P18146 543 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 TNFAIP3P21580 790 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 VIPR2P41587 438 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 MAPKAPK3Q16644 382 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 FBXO47Q5MNV8 452 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 SULT6B1Q6IMI4 303 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 KIAA0408Q6ZU52 694 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 USP49Q70CQ1 688 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 PPP1R32Q7Z5V6 425 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 GATAD2AQ86YP4 633 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 COLGALT2Q8IYK4 626 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 SLC17A8Q8NDX2 589 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 FAM46DQ8NEK8 389 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 ADAMTS17Q8TE56 1095 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 RAPGEF4Q8WZA2 1011 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 LCORQ96JN0 433 aaPredicted RBP5.95□□□□□ -1.46
LINC00397-202ENST00000606785 KLHL32Q96NJ5 620 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 PPP1R9BQ96SB3 815 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 NELL2Q99435 816 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 TCF25Q9BQ70 676 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 CPEB1Q9BZB8 566 aaKnown RBP5.95□□□□□ -1.46
LINC00397-202ENST00000606785 TMX4Q9H1E5 349 aaPredicted RBP5.95□□□□□ -1.46
LINC00397-202ENST00000606785 DHX36Q9H2U1 1008 aaKnown RBP5.95□□□□□ -1.46
LINC00397-202ENST00000606785 CAPN11Q9UMQ6 739 aa5.95□□□□□ -1.46
LINC00397-202ENST00000606785 SCAF8Q9UPN6 1271 aaKnown RBP5.95□□□□□ -1.46
LINC00397-202ENST00000606785 E9PLN8 166 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 CCP110O43303 1012 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 ASNA1O43681 348 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 STC2O76061 302 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 KIF20AO95235 890 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 ITGA2BP08514 1039 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 FDXRP22570 491 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 CPT1AP50416 773 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 PTTG1IPP53801 180 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 POLE2P56282 527 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 RIN1Q13671 783 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 ARHGEF7Q14155 803 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 FAM214AQ32MH5 1076 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 HYIQ5T013 277 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 ATXN7L2Q5T6C5 722 aaPredicted RBP5.94□□□□□ -1.46
LINC00397-202ENST00000606785 CRTC1Q6UUV9 634 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 RSRC2Q7L4I2 434 aaKnown RBP5.94□□□□□ -1.46
LINC00397-202ENST00000606785 DOK3Q7L591 496 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 MOGAT3Q86VF5 341 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 GAS2L3Q86XJ1 694 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 CARFQ8N187 725 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 FITM2Q8N6M3 262 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 ZFP28Q8NHY6 868 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 SPPL3Q8TCT6 385 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 OTUD7AQ8TE49 926 aaPredicted RBP5.94□□□□□ -1.46
LINC00397-202ENST00000606785 RUBCNQ92622 972 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 PRPF18Q99633 342 aaKnown RBP5.94□□□□□ -1.46
LINC00397-202ENST00000606785 VKORC1Q9BQB6 163 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 CNPPD1Q9BV87 410 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 IMPG2Q9BZV3 1241 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 PCDHAC1Q9H158 963 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 XPNPEP3Q9NQH7 507 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 SRP68Q9UHB9 627 aaKnown RBP5.94□□□□□ -1.46
LINC00397-202ENST00000606785 RAPGEFL1Q9UHV5 662 aa5.94□□□□□ -1.46
LINC00397-202ENST00000606785 HERC5Q9UII4 1024 aaKnown RBP5.94□□□□□ -1.46
LINC00397-202ENST00000606785 A0A1W2PRX2 142 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 MATN2O00339 956 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms