RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 MGAMO43451 1857 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 PLXNA1Q9UIW2 1896 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 SMIM23A6NLE4 172 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 SIGLEC16A6NMB1 481 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 TRIM66O15016 1216 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 LIASO43766 372 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 EPHX2P34913 555 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 IGBP1P78318 339 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 AUHQ13825 339 aaKnown RBP20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 RELL1Q8IUW5 271 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 CEP120Q8N960 986 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 UHMK1Q8TAS1 419 aaKnown RBP20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 EPS8L3Q8TE67 593 aaKnown RBP20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 IPO4Q8TEX9 1081 aaKnown RBP20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 SLC10A4Q96EP9 437 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 ZNF668Q96K58 619 aaPredicted RBP20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 SELENOSQ9BQE4 189 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 FAM124BQ9H5Z6 455 aaPredicted RBP20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 EFCC1Q9HA90 598 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 IFT122Q9HBG6 1241 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 POLIQ9UNA4 740 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 IVNS1ABPQ9Y6Y0 642 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 LACTBL1A8MY62 500 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 F8VP50 259 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 GPR25O00155 361 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 ZNF252P-AS1Q0IIN9 211 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 HADHQ16836 314 aaKnown RBP20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 ZNF792Q3KQV3 632 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 WDR72Q3MJ13 1102 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 EAPPQ56P03 285 aaPredicted RBP20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 TFDP3Q5H9I0 405 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 LDLRAD1Q5T700 205 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 IZUMO3Q5VZ72 239 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 DENND1BQ6P3S1 775 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 MFSD7Q6UXD7 560 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 PPTC7Q8NI37 304 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 FNIP1Q8TF40 1166 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 CCDC77Q9BR77 488 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 VRTNQ9H8Y1 702 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 EFR3BQ9Y2G0 817 aa20.24■□□□□ 0.83
PRKCSH-209ENST00000589838 RBM47A0AV96 593 aaKnown RBP20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 UNCXA6NJT0 531 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 PI4K2BG5E9Z4 385 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 MEFVO15553 781 aaPredicted RBP20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 TCEA3O75764 348 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 KRT7P08729 469 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 KRT3P12035 628 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 ATF7P17544 494 aaPredicted RBP20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 KLRC2P26717 231 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 CHKAP35790 457 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 GSCP56915 257 aaPredicted RBP20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 IRX5P78411 483 aaPredicted RBP20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 KAZNQ674X7 775 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 TAPT1Q6NXT6 567 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 CDR2LQ86X02 465 aaPredicted RBP20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 TTC39CQ8N584 583 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 C1orf127Q8N9H9 656 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 EMID1Q96A84 441 aaPredicted RBP20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 FHDC1Q9C0D6 1143 aaPredicted RBP20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 SIX4Q9UIU6 781 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 AKT3Q9Y243 479 aa20.23■□□□□ 0.83
PRKCSH-209ENST00000589838 A0A087WZ62 844 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 C5orf60A6NFR6 353 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 ACSL3O95573 720 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 NFICP08651 508 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 CHN1P15882 459 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 PSMA2P25787 234 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 RAD23BP54727 409 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 IFI35P80217 286 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 ZNF268Q14587 947 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 ATP13A4Q4VNC1 1196 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 JADE1Q6IE81 842 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 OTUD6BQ8N6M0 293 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 LINC01465Q8N7H1 131 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 FDXACB1Q9BRP7 624 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 DDX23Q9BUQ8 820 aaKnown RBP20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 FRMD8P1Q9BZ68 369 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 ZNF148Q9UQR1 794 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 STRNO43815 780 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 VPS41P49754 854 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 PSMC1P62191 440 aaKnown RBP20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 OGDHQ02218 1023 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 AMHR2Q16671 573 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 TMEM63BQ5T3F8 832 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 CYP4A22Q5TCH4 519 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 HIBCHQ6NVY1 386 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 CPLX4Q7Z7G2 160 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 ZNF467Q7Z7K2 595 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 NT5DC4Q86YG4 428 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 MDM1Q8TC05 714 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 CHMP6Q96FZ7 201 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 PDZD7Q9H5P4 517 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 SYNCQ9H7C4 482 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 INTS9Q9NV88 658 aaKnown RBP20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 SLC45A1Q9Y2W3 748 aa20.22■□□□□ 0.83
PRKCSH-209ENST00000589838 hCG_1818297A0A087WSY0 165 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 LRRD1A4D1F6 860 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 ITGB3P05106 788 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 IQCF3P0C7M6 154 aa20.21■□□□□ 0.83
PRKCSH-209ENST00000589838 KRT10P13645 584 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms