RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 AARSP49588 968 aaKnown RBP eCLIP16.88■□□□□ 0.29
USB1-208ENST00000563207 STARD6P59095 220 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 GRM2Q14416 872 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 ZCWPW2Q504Y3 356 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 SLC44A4Q53GD3 710 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 CT47A1Q5JQC4 288 aaPredicted RBP16.88■□□□□ 0.29
USB1-208ENST00000563207 FAM78AQ5JUQ0 283 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 SPATA1Q5VX52 437 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 ISM2Q6H9L7 571 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 PHLDB3Q6NSJ2 640 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 MTSS1LQ765P7 747 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 BRSK2Q8IWQ3 736 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 SAAL1Q96ER3 474 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 IRF2BPLQ9H1B7 796 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 DACH1Q9UI36 760 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 C2CD2Q9Y426 696 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 R4GN57 208 aa16.88■□□□□ 0.29
USB1-208ENST00000563207 PPP1R3GB7ZBB8 358 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 MAPK13O15264 365 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 EXOC3O60645 756 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 OAZ2O95190 189 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 LETM1O95202 739 aaPredicted RBP16.87■□□□□ 0.29
USB1-208ENST00000563207 NR3C1P04150 777 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 MYL4P12829 197 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 CYP3A5P20815 502 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 CYP2J2P51589 502 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 NLRP12P59046 1061 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 LILRA4P59901 499 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 YWHAHQ04917 246 aaPredicted RBP16.87■□□□□ 0.29
USB1-208ENST00000563207 SNRNP35Q16560 246 aaKnown RBP16.87■□□□□ 0.29
USB1-208ENST00000563207 TPGS2Q68CL5 300 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 DSTYKQ6XUX3 929 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 RTL10Q7L3V2 364 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 MAML2Q8IZL2 1156 aaPredicted RBP16.87■□□□□ 0.29
USB1-208ENST00000563207 APPL2Q8NEU8 664 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 BEST2Q8NFU1 509 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 PJA1Q8NG27 643 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 DNAJC25Q9H1X3 360 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 AVENQ9NQS1 362 aaPredicted RBP16.87■□□□□ 0.29
USB1-208ENST00000563207 RBAKQ9NYW8 714 aaPredicted RBP16.87■□□□□ 0.29
USB1-208ENST00000563207 AFF4Q9UHB7 1163 aaKnown RBP16.87■□□□□ 0.29
USB1-208ENST00000563207 FRMD4BQ9Y2L6 1034 aa16.87■□□□□ 0.29
USB1-208ENST00000563207 NR2F2P24468 414 aa16.86■□□□□ 0.29
USB1-208ENST00000563207 VIPR2P41587 438 aa16.86■□□□□ 0.29
USB1-208ENST00000563207 FKBP3Q00688 224 aaKnown RBP16.86■□□□□ 0.29
USB1-208ENST00000563207 ENPEPQ07075 957 aa16.86■□□□□ 0.29
USB1-208ENST00000563207 DUSP4Q13115 394 aa16.86■□□□□ 0.29
USB1-208ENST00000563207 MLF2Q15773 248 aaPredicted RBP16.86■□□□□ 0.29
USB1-208ENST00000563207 C9orf57Q5W0N0 161 aa16.86■□□□□ 0.29
USB1-208ENST00000563207 ATAD1Q8NBU5 361 aa16.86■□□□□ 0.29
USB1-208ENST00000563207 RSPRY1Q96DX4 576 aa16.86■□□□□ 0.29
USB1-208ENST00000563207 SENP8Q96LD8 212 aa16.86■□□□□ 0.29
USB1-208ENST00000563207 DDX23Q9BUQ8 820 aaKnown RBP16.86■□□□□ 0.29
USB1-208ENST00000563207 HEBP1Q9NRV9 189 aa16.86■□□□□ 0.29
USB1-208ENST00000563207 COL4A2P08572 1712 aa16.86■□□□□ 0.29
USB1-208ENST00000563207 PATJQ8NI35 1801 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 ANO9A1A5B4 782 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 GOLGA8IPA6NC78 632 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 GOLGA8JA6NMD2 632 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 TULP1O00294 542 aaPredicted RBP16.85■□□□□ 0.29
USB1-208ENST00000563207 PIRO00625 290 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 CETN3O15182 167 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 ECI2O75521 394 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 CD44P16070 742 aaKnown RBP16.85■□□□□ 0.29
USB1-208ENST00000563207 PAK1Q13153 545 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 ADAM9Q13443 819 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 TMEM132DQ14C87 1099 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 TEAD2Q15562 447 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 STXBP5Q5T5C0 1151 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 OVOS1Q6IE37 1185 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 SASS6Q6UVJ0 657 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 USP37Q86T82 979 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 CBWD2Q8IUF1 395 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 EFCAB13Q8IY85 973 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 OR10T2Q8NGX3 314 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 CACTINQ8WUQ7 758 aaKnown RBP16.85■□□□□ 0.29
USB1-208ENST00000563207 NKD2Q969F2 451 aaPredicted RBP16.85■□□□□ 0.29
USB1-208ENST00000563207 ZNF512Q96ME7 567 aaPredicted RBP16.85■□□□□ 0.29
USB1-208ENST00000563207 MKNK1Q9BUB5 465 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 LRRC3Q9BY71 257 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 GDE1Q9NZC3 331 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 TMEM63CQ9P1W3 806 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 YIPF1Q9Y548 306 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 TICRRQ7Z2Z1 1910 aa16.85■□□□□ 0.29
USB1-208ENST00000563207 CACNA1IQ9P0X4 2223 aa16.84■□□□□ 0.29
USB1-208ENST00000563207 KANSL1LA0AUZ9 987 aa16.84■□□□□ 0.29
USB1-208ENST00000563207 PAX3P23760 479 aa16.84■□□□□ 0.29
USB1-208ENST00000563207 PSMC2P35998 433 aaKnown RBP16.84■□□□□ 0.29
USB1-208ENST00000563207 UBXN2BQ14CS0 331 aa16.84■□□□□ 0.29
USB1-208ENST00000563207 PSMD6Q15008 389 aa16.84■□□□□ 0.29
USB1-208ENST00000563207 ANKRD40Q6AI12 368 aa16.84■□□□□ 0.29
USB1-208ENST00000563207 CAVIN1Q6NZI2 390 aaKnown RBP16.84■□□□□ 0.29
USB1-208ENST00000563207 VITQ6UXI7 678 aa16.84■□□□□ 0.29
USB1-208ENST00000563207 TPRG1Q6ZUI0 275 aa16.84■□□□□ 0.29
USB1-208ENST00000563207 PDZD4Q76G19 769 aaPredicted RBP16.84■□□□□ 0.29
USB1-208ENST00000563207 ZC3H3Q8IXZ2 948 aaKnown RBP16.84■□□□□ 0.29
USB1-208ENST00000563207 SHKBP1Q8TBC3 707 aa16.84■□□□□ 0.29
USB1-208ENST00000563207 NOC3LQ8WTT2 800 aaKnown RBP16.84■□□□□ 0.29
USB1-208ENST00000563207 NELFBQ8WX92 580 aa16.84■□□□□ 0.29
USB1-208ENST00000563207 ASB16Q96NS5 453 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms