RNA–Protein interactions for RNA: ENST00000560457.5

DCAF11-229, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-229	ENST00000560457	NOTUM	Q6P988	496 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	SCARA5	Q6ZMJ2	495 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	POLN	Q7Z5Q5	900 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	HOOK3	Q86VS8	718 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	CCDC50	Q8IVM0	306 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	NME8	Q8N427	588 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	CPB2	Q96IY4	423 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	ZNF668	Q96K58	619 aa	Predicted RBP	13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	KATNAL1	Q9BW62	490 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	OSBPL8	Q9BZF1	889 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	FOXP3	Q9BZS1	431 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	DCLK3	Q9C098	648 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	AP5M1	Q9H0R1	490 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	NEUROG2	Q9H2A3	272 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	ADAMTS10	Q9H324	1103 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	CALCOCO1	Q9P1Z2	691 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	ABT1	Q9ULW3	272 aa	Known RBP	13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	AGAP1	Q9UPQ3	857 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	GNE	Q9Y223	722 aa	Known RBP	13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	SNX24	Q9Y343	169 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	NFS1	Q9Y697	457 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	MCM3AP	O60318	1980 aa		13.6	□□□□□ -0.23
DCAF11-229	ENST00000560457	FAM170A	A1A519	330 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	SRRM3	A6NNA2	597 aa	Predicted RBP	13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	XPOT	O43592	962 aa	Known RBP	13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	KRT7	P08729	469 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	NUDT17	P0C025	328 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	GNAT1	P11488	350 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	ATF7	P17544	494 aa	Predicted RBP	13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	SSR1	P43307	286 aa	Known RBP	13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	CDR1	P51861	262 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	PLTP	P55058	493 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	HADH	Q16836	314 aa	Known RBP	13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	TTMP	Q5BVD1	217 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	CYP4F22	Q6NT55	531 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	KDM7A	Q6ZMT4	941 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	CATSPER4	Q7RTX7	472 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	TMEM192	Q8IY95	271 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	ZDHHC14	Q8IZN3	488 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	WDTC1	Q8N5D0	677 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	CCDC89	Q8N998	374 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	SLC4A11	Q8NBS3	891 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	BEST2	Q8NFU1	509 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	CXorf38	Q8TB03	319 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	SOCS4	Q8WXH5	440 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	TFAP2B	Q92481	460 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	ARL8A	Q96BM9	186 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	KIF12	Q96FN5	646 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	NCAPG	Q9BPX3	1015 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	CAPS2	Q9BXY5	557 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	TRIM31	Q9BZY9	425 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	PABPC3	Q9H361	631 aa	Known RBP	13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	GRHL1	Q9NZI5	618 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	POLI	Q9UNA4	740 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	UST	Q9Y2C2	406 aa		13.59	□□□□□ -0.23
DCAF11-229	ENST00000560457	HSPA1A	P0DMV8	641 aa	Known RBP	13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	HSPA1B	P0DMV9	641 aa	Known RBP	13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	SMIM10L2A	P0DMW4	78 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	SMIM10L2B	P0DMW5	78 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	CYP2C9	P11712	490 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	KRT3	P12035	628 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	RARG	P13631	454 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	RGS2	P41220	211 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	GABRB2	P47870	512 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	PSEN2	P49810	448 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	TAS2R40	P59535	323 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	KRT17	Q04695	432 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	IFFO1	Q0D2I5	559 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	NFX1	Q12986	1120 aa	Known RBP	13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	KLF1	Q13351	362 aa	Predicted RBP	13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	MFSD10	Q14728	455 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	UAP1	Q16222	522 aa	Predicted RBP	13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	ZNF394	Q53GI3	561 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	DENND1B	Q6P3S1	775 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	ZDHHC24	Q6UX98	284 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	PHLDB2	Q86SQ0	1253 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	CDR2L	Q86X02	465 aa	Predicted RBP	13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	CPNE8	Q86YQ8	564 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	LRRC52	Q8N7C0	313 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	IPO4	Q8TEX9	1081 aa	Known RBP	13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	ZBTB10	Q96DT7	871 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	HHIPL1	Q96JK4	782 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	TMEM109	Q9BVC6	243 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	TRIM7	Q9C029	511 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	STMN4	Q9H169	189 aa	Predicted RBP	13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	SYNC	Q9H7C4	482 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	SETD4	Q9NVD3	440 aa		13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	DRG1	Q9Y295	367 aa	Known RBP	13.58	□□□□□ -0.24
DCAF11-229	ENST00000560457	TCRBV7S2A1N4T	A0A589	114 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	HAS3	O00219	553 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	GPR32	O75388	356 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	CD4	P01730	458 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	KRT14	P02533	472 aa		13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.57	□□□□□ -0.24
DCAF11-229	ENST00000560457	SETSIP	P0DME0	302 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms