RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SNX16P57768 344 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 PTP4A2Q12974 167 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 PLEKHA7Q6IQ23 1121 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 DENND1BQ6P3S1 775 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 LCLAT1Q6UWP7 414 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 TOP6BLQ8N6T0 577 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 C1orf131Q8NDD1 294 aaKnown RBP14.62□□□□□ -0.07
TPM1-215ENST00000558868 APPL2Q8NEU8 664 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 ACTRT1Q8TDG2 376 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 TSC1Q92574 1164 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 DDX27Q96GQ7 796 aaKnown RBP14.62□□□□□ -0.07
TPM1-215ENST00000558868 PSMB7Q99436 277 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 NAP1L3Q99457 506 aaPredicted RBP14.62□□□□□ -0.07
TPM1-215ENST00000558868 ADAM2Q99965 735 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 FTHL17Q9BXU8 183 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 CARD9Q9H257 536 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 RSAD1Q9HA92 442 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 ANAPC7Q9UJX3 599 aa14.62□□□□□ -0.07
TPM1-215ENST00000558868 PACSIN2Q9UNF0 486 aaPredicted RBP14.62□□□□□ -0.07
TPM1-215ENST00000558868 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.62□□□□□ -0.07
TPM1-215ENST00000558868 CCDC66A2RUB6 948 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 ARL5CA6NH57 179 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 TMEM110-MUSTN1A8MSY1 372 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 O00370 1275 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 CEP104O60308 925 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 MICAL2O94851 1124 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 EOMESO95936 686 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 SETSIPP0DME0 302 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 CCL5P13501 91 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 SELPP16109 830 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 COMTP21964 271 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 MCM3P25205 808 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 CTNNA2P26232 953 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 MLH1P40692 756 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 DNA2P51530 1060 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 DNAJC24Q6P3W2 148 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 AGMOQ6ZNB7 445 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 LIMS2Q7Z4I7 341 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 MMGT1Q8N4V1 131 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 SPATA4Q8NEY3 305 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 OR6B3Q8NGW1 331 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.61□□□□□ -0.07
TPM1-215ENST00000558868 FEZF2Q8TBJ5 459 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 UROC1Q96N76 676 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 TWNKQ96RR1 684 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 GAD1Q99259 594 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 ZSWIM1Q9BR11 485 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 MRPL45Q9BRJ2 306 aaKnown RBP14.61□□□□□ -0.07
TPM1-215ENST00000558868 PLVAPQ9BX97 442 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 TSPYL2Q9H2G4 693 aaPredicted RBP14.61□□□□□ -0.07
TPM1-215ENST00000558868 GOLPH3Q9H4A6 298 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 RGS18Q9NS28 235 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 HESX1Q9UBX0 185 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 OGDHLQ9ULD0 1010 aa14.61□□□□□ -0.07
TPM1-215ENST00000558868 TTC7AQ9ULT0 858 aaPredicted RBP14.61□□□□□ -0.07
TPM1-215ENST00000558868 ARHGEF37A1IGU5 675 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 A8MXQ7 604 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 PGRMC1O00264 195 aaKnown RBP14.6□□□□□ -0.07
TPM1-215ENST00000558868 PDE2AO00408 941 aaPredicted RBP14.6□□□□□ -0.07
TPM1-215ENST00000558868 DDX3YO15523 660 aaKnown RBP14.6□□□□□ -0.07
TPM1-215ENST00000558868 WARSP23381 471 aaKnown RBP14.6□□□□□ -0.07
TPM1-215ENST00000558868 SSTR3P32745 418 aaPredicted RBP14.6□□□□□ -0.07
TPM1-215ENST00000558868 MAN1A1P33908 653 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 GNL1P36915 607 aaPredicted RBP14.6□□□□□ -0.07
TPM1-215ENST00000558868 GSCP56915 257 aaPredicted RBP14.6□□□□□ -0.07
TPM1-215ENST00000558868 LILRA4P59901 499 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 SOX4Q06945 474 aaPredicted RBP14.6□□□□□ -0.07
TPM1-215ENST00000558868 GRIK3Q13003 919 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 MAMLD1Q13495 774 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 ZNF268Q14587 947 aaPredicted RBP14.6□□□□□ -0.07
TPM1-215ENST00000558868 NAA30Q147X3 362 aaPredicted RBP14.6□□□□□ -0.07
TPM1-215ENST00000558868 SOWAHAQ2M3V2 549 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 ARHGAP17Q68EM7 881 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 LRRC8DQ7L1W4 858 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 MTERF4Q7Z6M4 381 aaKnown RBP14.6□□□□□ -0.07
TPM1-215ENST00000558868 ECHDC2Q86YB7 292 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 CRYBG2Q8N1P7 616 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 TMEM130Q8N3G9 435 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 RASGEF1CQ8N431 466 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 WDTC1Q8N5D0 677 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 C3orf20Q8ND61 904 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 IPO4Q8TEX9 1081 aaKnown RBP14.6□□□□□ -0.07
TPM1-215ENST00000558868 RUBCNQ92622 972 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 TNIP3Q96KP6 325 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 ZFP42Q96MM3 310 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 DEFB118Q96PH6 123 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.6□□□□□ -0.071e-6■□□□□ 10.6
TPM1-215ENST00000558868 RNF208Q9H0X6 261 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 SYNCQ9H7C4 482 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 HMGXB4Q9UGU5 601 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 IP6K2Q9UHH9 426 aa14.6□□□□□ -0.07
TPM1-215ENST00000558868 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.6□□□□□ -0.07
TPM1-215ENST00000558868 FAM170AA1A519 330 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 TARSL2A2RTX5 802 aaKnown RBP14.59□□□□□ -0.07
TPM1-215ENST00000558868 M0QYV0 167 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 PODXLO00592 558 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 INPPL1O15357 1258 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 MGEA5O60502 916 aa14.59□□□□□ -0.07
TPM1-215ENST00000558868 PROSCO94903 275 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms