RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PANK4Q9NVE7 773 aa7.13□□□□□ -1.27
SLIRP-203ENST00000554074 SPATA6Q9NWH7 488 aaPredicted RBP7.13□□□□□ -1.27
SLIRP-203ENST00000554074 SLC27A5Q9Y2P5 690 aa7.13□□□□□ -1.27
SLIRP-203ENST00000554074 PCDHGA2Q9Y5H1 932 aa7.13□□□□□ -1.27
SLIRP-203ENST00000554074 MYO18AQ92614 2054 aaKnown RBP7.12□□□□□ -1.27
SLIRP-203ENST00000554074 MYOFQ9NZM1 2061 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 NCANO14594 1321 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 HEPACAM2A8MVW5 462 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 EIF3DO15371 548 aaKnown RBP eCLIP7.12□□□□□ -1.27
SLIRP-203ENST00000554074 EXTL3O43909 919 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 KINO60870 393 aaKnown RBP7.12□□□□□ -1.27
SLIRP-203ENST00000554074 LILRB5O75023 590 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 YEATS4O95619 227 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 HAPLN1P10915 354 aaPredicted RBP7.12□□□□□ -1.27
SLIRP-203ENST00000554074 IDEP14735 1019 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 GJA1P17302 382 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 ATF6P18850 670 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 CD72P21854 359 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 GABRR2P28476 465 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 VIPR2P41587 438 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 CASP5P51878 434 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 PLCB2Q00722 1185 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 TSPY1Q01534 308 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 CEBPZQ03701 1054 aaKnown RBP7.12□□□□□ -1.27
SLIRP-203ENST00000554074 PPP2R5DQ14738 602 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 STK38Q15208 465 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 SURF1Q15526 300 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 E2F4Q16254 413 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 MGAT5BQ3V5L5 792 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 ARHGAP29Q52LW3 1261 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 ARHGAP15Q53QZ3 475 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 WSCD1Q658N2 575 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 LRRTM3Q86VH5 581 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 ARID3BQ8IVW6 561 aaPredicted RBP7.12□□□□□ -1.27
SLIRP-203ENST00000554074 SYCP3Q8IZU3 236 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 TTC9BQ8N6N2 239 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 C1orf127Q8N9H9 656 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 SUMF1Q8NBK3 374 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 CXorf38Q8TB03 319 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 FAM3CQ92520 227 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 RUBCNQ92622 972 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 ZNF396Q96N95 335 aaPredicted RBP7.12□□□□□ -1.27
SLIRP-203ENST00000554074 ACBD6Q9BR61 282 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 FAM213AQ9BRX8 229 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 IKZF4Q9H2S9 585 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 SLITRK6Q9H5Y7 841 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 TASP1Q9H6P5 420 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 C8orf33Q9H7E9 229 aaPredicted RBP7.12□□□□□ -1.27
SLIRP-203ENST00000554074 MAGEF1Q9HAY2 307 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 IL21Q9HBE4 155 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 KBTBD4Q9NVX7 518 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 ZSCAN32Q9NX65 697 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 GDAP2Q9NXN4 497 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 RBAKQ9NYW8 714 aaPredicted RBP7.12□□□□□ -1.27
SLIRP-203ENST00000554074 ITGA11Q9UKX5 1188 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 PIAS3Q9Y6X2 628 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 R4GN57 208 aa7.12□□□□□ -1.27
SLIRP-203ENST00000554074 UBE4BO95155 1302 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 MYBPHLA2RUH7 354 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 GABRDO14764 452 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 SPTLC2O15270 562 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 CUTAO60888 179 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 HUS1O60921 280 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 PAPSS2O95340 614 aaPredicted RBP7.11□□□□□ -1.27
SLIRP-203ENST00000554074 ITGB3P05106 788 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 HSP90AA1P07900 732 aaKnown RBP7.11□□□□□ -1.27
SLIRP-203ENST00000554074 CSH1P0DML2 217 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 CSH2P0DML3 217 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 CHRNB1P11230 501 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 TDGF1P13385 188 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 DDX6P26196 483 aaKnown RBP eCLIP7.11□□□□□ -1.27
SLIRP-203ENST00000554074 POLR2BP30876 1174 aaKnown RBP7.11□□□□□ -1.27
SLIRP-203ENST00000554074 LHX1P48742 406 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 CCR3P51677 355 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 NRLP54845 237 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 WNT7BP56706 349 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 SNRPFP62306 86 aaKnown RBP7.11□□□□□ -1.27
SLIRP-203ENST00000554074 RBP5P82980 135 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 TFAMQ00059 246 aaKnown RBP7.11□□□□□ -1.27
SLIRP-203ENST00000554074 AMPD3Q01432 767 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 MYL7Q01449 175 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 MTAPQ13126 283 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 LRRC32Q14392 662 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 INTS6LQ5JSJ4 861 aaKnown RBP7.11□□□□□ -1.27
SLIRP-203ENST00000554074 GPR158Q5T848 1215 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 ATL3Q6DD88 541 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 DPH6Q7L8W6 267 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 ERMP1Q7Z2K6 904 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 LIMS2Q7Z4I7 341 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 RALGPS2Q86X27 583 aaPredicted RBP7.11□□□□□ -1.27
SLIRP-203ENST00000554074 YAF2Q8IY57 180 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 GPD1LQ8N335 351 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 SYNPOQ8N3V7 929 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 PDCL2Q8N4E4 241 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 TOP6BLQ8N6T0 577 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 CELF5Q8N6W0 485 aaKnown RBP7.11□□□□□ -1.27
SLIRP-203ENST00000554074 IQUBQ8NA54 791 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 FAM200AQ8TCP9 573 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 KCNG4Q8TDN1 519 aa7.11□□□□□ -1.27
SLIRP-203ENST00000554074 CSGALNACT1Q8TDX6 532 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms