RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 H0Y858 1186 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 PAX3P23760 479 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 VIPR2P41587 438 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 CYP4F8P98187 520 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 TCF15Q12870 199 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 PSMD6Q15008 389 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 SURF1Q15526 300 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 TRAPPC11Q7Z392 1133 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 DCP1BQ8IZD4 617 aaKnown RBP22.17■■□□□ 1.14
HIF1A-206ENST00000553999 PLEKHO2Q8TD55 490 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 MMS19Q96T76 1030 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 FOXQ1Q9C009 403 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 KIAA1586Q9HCI6 787 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 GDE1Q9NZC3 331 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 USP25Q9UHP3 1055 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 MAFFQ9ULX9 164 aa22.17■■□□□ 1.14
HIF1A-206ENST00000553999 ZNF202O95125 648 aa22.16■■□□□ 1.14
HIF1A-206ENST00000553999 FCARP24071 287 aa22.16■■□□□ 1.14
HIF1A-206ENST00000553999 MYO1EQ12965 1108 aa22.16■■□□□ 1.14
HIF1A-206ENST00000553999 VEPH1Q14D04 833 aa22.16■■□□□ 1.14
HIF1A-206ENST00000553999 TAF12Q16514 161 aa22.16■■□□□ 1.14
HIF1A-206ENST00000553999 SOWAHAQ2M3V2 549 aa22.16■■□□□ 1.14
HIF1A-206ENST00000553999 DNAJB7Q7Z6W7 309 aaPredicted RBP22.16■■□□□ 1.14
HIF1A-206ENST00000553999 ZSCAN18Q8TBC5 510 aaPredicted RBP22.16■■□□□ 1.14
HIF1A-206ENST00000553999 LRRC3Q9BY71 257 aa22.16■■□□□ 1.14
HIF1A-206ENST00000553999 ATXN3LQ9H3M9 355 aa22.16■■□□□ 1.14
HIF1A-206ENST00000553999 AVENQ9NQS1 362 aaPredicted RBP22.16■■□□□ 1.14
HIF1A-206ENST00000553999 WNT16Q9UBV4 365 aa22.16■■□□□ 1.14
HIF1A-206ENST00000553999 MUC6Q6W4X9 2439 aa22.16■■□□□ 1.14
HIF1A-206ENST00000553999 NCANO14594 1321 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 A0A1W2PQ27 194 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 A0A1W2PQ64 194 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 A0A1W2PQD8 194 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 PHACTR2O75167 634 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 ATP2C2O75185 946 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 LRRN2O75325 713 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 PRPF40AO75400 957 aaKnown RBP22.15■■□□□ 1.14
HIF1A-206ENST00000553999 CST3P01034 146 aaPredicted RBP22.15■■□□□ 1.14
HIF1A-206ENST00000553999 PDGFRBP09619 1106 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 GABRR2P28476 465 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 MYL7Q01449 175 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 BIRC3Q13489 604 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 CEP135Q66GS9 1140 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 ZNF516Q92618 1163 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 GZF1Q9H116 711 aaPredicted RBP22.15■■□□□ 1.14
HIF1A-206ENST00000553999 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.15■■□□□ 1.141e-6■■■■■ 71
HIF1A-206ENST00000553999 SLC2A4RGQ9NR83 387 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 GTF3C4Q9UKN8 822 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 MAGED2Q9UNF1 606 aaPredicted RBP22.15■■□□□ 1.14
HIF1A-206ENST00000553999 PCDHB5Q9Y5E4 795 aa22.15■■□□□ 1.14
HIF1A-206ENST00000553999 NR3C1P04150 777 aa22.14■■□□□ 1.13
HIF1A-206ENST00000553999 DCNP07585 359 aaKnown RBP22.14■■□□□ 1.13
HIF1A-206ENST00000553999 HAPLN1P10915 354 aaPredicted RBP22.14■■□□□ 1.13
HIF1A-206ENST00000553999 AOC1P19801 751 aa22.14■■□□□ 1.13
HIF1A-206ENST00000553999 CD72P21854 359 aa22.14■■□□□ 1.13
HIF1A-206ENST00000553999 CYP2F1P24903 491 aa22.14■■□□□ 1.13
HIF1A-206ENST00000553999 DPYDQ12882 1025 aa22.14■■□□□ 1.13
HIF1A-206ENST00000553999 INTS6LQ5JSJ4 861 aaKnown RBP22.14■■□□□ 1.13
HIF1A-206ENST00000553999 ALYREFQ86V81 257 aaKnown RBP22.14■■□□□ 1.13
HIF1A-206ENST00000553999 SMYD4Q8IYR2 804 aaPredicted RBP22.14■■□□□ 1.13
HIF1A-206ENST00000553999 ERCC4Q92889 916 aaPredicted RBP22.14■■□□□ 1.13
HIF1A-206ENST00000553999 PSMG2Q969U7 264 aa22.14■■□□□ 1.13
HIF1A-206ENST00000553999 CCDC47Q96A33 483 aaKnown RBP22.14■■□□□ 1.13
HIF1A-206ENST00000553999 ASB16Q96NS5 453 aa22.14■■□□□ 1.13
HIF1A-206ENST00000553999 ZFP14Q9HCL3 533 aa22.14■■□□□ 1.13
HIF1A-206ENST00000553999 GDAP2Q9NXN4 497 aa22.14■■□□□ 1.13
HIF1A-206ENST00000553999 FAM237AA0A1B0GTK4 181 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 GOLGA6L4A6NEF3 574 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 ECI2O75521 394 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 LMO2P25791 158 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 TUFMP49411 452 aaKnown RBP22.13■■□□□ 1.13
HIF1A-206ENST00000553999 EPHA5P54756 1037 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 PTPN5P54829 565 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 MYL6P60660 151 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 PSMD2Q13200 908 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 TRPC3Q13507 836 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 PNOCQ13519 176 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 DDR2Q16832 855 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 GPR158Q5T848 1215 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 SCARA5Q6ZMJ2 495 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 GAREM2Q75VX8 874 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 SCN4BQ8IWT1 228 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 TOP6BLQ8N6T0 577 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 SPPL2BQ8TCT7 592 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 KBTBD7Q8WVZ9 684 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 SMARCD2Q92925 531 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 SYT15Q9BQS2 421 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 MRPL45Q9BRJ2 306 aaKnown RBP22.13■■□□□ 1.13
HIF1A-206ENST00000553999 SMG9Q9H0W8 520 aaKnown RBP22.13■■□□□ 1.13
HIF1A-206ENST00000553999 KCTD10Q9H3F6 313 aa22.13■■□□□ 1.13
HIF1A-206ENST00000553999 NXF1Q9UBU9 619 aaKnown RBP22.13■■□□□ 1.13
HIF1A-206ENST00000553999 ARIH1Q9Y4X5 557 aaPredicted RBP22.13■■□□□ 1.13
HIF1A-206ENST00000553999 MYBPHLA2RUH7 354 aa22.12■■□□□ 1.13
HIF1A-206ENST00000553999 LRRIQ3A6PVS8 624 aaPredicted RBP22.12■■□□□ 1.13
HIF1A-206ENST00000553999 GALR2O43603 387 aaPredicted RBP22.12■■□□□ 1.13
HIF1A-206ENST00000553999 CLCN5P51795 746 aa22.12■■□□□ 1.13
HIF1A-206ENST00000553999 SNRPFP62306 86 aaKnown RBP22.12■■□□□ 1.13
HIF1A-206ENST00000553999 TNNC1P63316 161 aa22.12■■□□□ 1.13
HIF1A-206ENST00000553999 DLG4P78352 724 aa22.12■■□□□ 1.13
HIF1A-206ENST00000553999 NUCB2P80303 420 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms