RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ZBED4O75132 1171 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 MTA2O94776 668 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 ATP6V1C1P21283 382 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 MARK3P27448 753 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 DYNLT1P63172 113 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 PGM5Q15124 567 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 CLEC16AQ2KHT3 1053 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 PARP6Q2NL67 630 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 MCOLN2Q8IZK6 566 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 BICD1Q96G01 975 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 ADARB2Q9NS39 739 aaKnown RBP13.03□□□□□ -0.32
HDAC7-230ENST00000552960 LGALS13Q9UHV8 139 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 UBE4BO95155 1302 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 MROH7Q68CQ1 1323 aa13.03□□□□□ -0.32
HDAC7-230ENST00000552960 KRT36O76013 467 aa13.02□□□□□ -0.32
HDAC7-230ENST00000552960 FGFR1P11362 822 aa13.02□□□□□ -0.32
HDAC7-230ENST00000552960 CETN2P41208 172 aa13.02□□□□□ -0.32
HDAC7-230ENST00000552960 MOGSQ13724 837 aa13.02□□□□□ -0.32
HDAC7-230ENST00000552960 EFTUD2Q15029 972 aaKnown RBP eCLIP13.02□□□□□ -0.327e-7■■■■□ 23.4
HDAC7-230ENST00000552960 UGCGQ16739 394 aa13.02□□□□□ -0.32
HDAC7-230ENST00000552960 TKFCQ3LXA3 575 aa13.02□□□□□ -0.32
HDAC7-230ENST00000552960 ANKS1BQ7Z6G8 1248 aa13.02□□□□□ -0.32
HDAC7-230ENST00000552960 TEX9Q8N6V9 391 aa13.02□□□□□ -0.32
HDAC7-230ENST00000552960 HELQQ8TDG4 1101 aa13.02□□□□□ -0.32
HDAC7-230ENST00000552960 ZNF75CPQ92670 426 aaPredicted RBP13.02□□□□□ -0.32
HDAC7-230ENST00000552960 DDX27Q96GQ7 796 aaKnown RBP13.02□□□□□ -0.32
HDAC7-230ENST00000552960 MAK16Q9BXY0 300 aaKnown RBP13.02□□□□□ -0.32
HDAC7-230ENST00000552960 LRRC42Q9Y546 428 aa13.02□□□□□ -0.32
HDAC7-230ENST00000552960 SPDYE16A6NNV3 312 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-230ENST00000552960 SGK1O00141 431 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 GYG2O15488 501 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 CFHP08603 1231 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 TROVE2P10155 538 aaKnown RBP eCLIP13.02□□□□□ -0.33
HDAC7-230ENST00000552960 DSG3P32926 999 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 CCDC15Q0P6D6 951 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 C11orf91Q3C1V1 193 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 SPOPLQ6IQ16 392 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 SV2AQ7L0J3 742 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 SULF1Q8IWU6 871 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 RFWD2Q8NHY2 731 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 DCPSQ96C86 337 aaKnown RBP13.02□□□□□ -0.33
HDAC7-230ENST00000552960 NMRK1Q9NWW6 199 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 ETAA1Q9NY74 926 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 HEY2Q9UBP5 337 aa13.02□□□□□ -0.33
HDAC7-230ENST00000552960 CAPN9O14815 690 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 FDX1P10109 184 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 SSTR1P30872 391 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 MRPS35P82673 323 aaKnown RBP13.01□□□□□ -0.33
HDAC7-230ENST00000552960 CNTN2Q02246 1040 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 KPNB1Q14974 876 aaKnown RBP13.01□□□□□ -0.33
HDAC7-230ENST00000552960 PDK4Q16654 411 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 MAPK6Q16659 721 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 XKR9Q5GH70 373 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 SNX30Q5VWJ9 437 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 CATSPERGQ6ZRH7 1159 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 SYDE1Q6ZW31 735 aaPredicted RBP13.01□□□□□ -0.33
HDAC7-230ENST00000552960 BBOF1Q8ND07 529 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 ASAP3Q8TDY4 903 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 STMN2Q93045 179 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 VTI1AQ96AJ9 217 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 MOV10L1Q9BXT6 1211 aaKnown RBP13.01□□□□□ -0.33
HDAC7-230ENST00000552960 FBXO6Q9NRD1 293 aaPredicted RBP13.01□□□□□ -0.33
HDAC7-230ENST00000552960 P4HA2O15460 535 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 WFS1O76024 890 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 RGS20O76081 388 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 PTPN4P29074 926 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 CNGA1P29973 690 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 PAPOLAP51003 745 aaKnown RBP13.01□□□□□ -0.33
HDAC7-230ENST00000552960 MTMR1Q13613 665 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 NBPF20Q3BBV1 942 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 PLEKHG4Q58EX7 1191 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 MDH1BQ5I0G3 518 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 ILDR2Q71H61 639 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 RHOT1Q8IXI2 618 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.01□□□□□ -0.33
HDAC7-230ENST00000552960 C10orf82Q8WW14 230 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 PDCD2LQ9BRP1 358 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 TMEM121Q9BTD3 319 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 DCLRE1BQ9H816 532 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 PXMP2Q9NR77 195 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 SAE1Q9UBE0 346 aaPredicted RBP13.01□□□□□ -0.33
HDAC7-230ENST00000552960 STOML1Q9UBI4 398 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 C2CD2Q9Y426 696 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 TLR3O15455 904 aaKnown RBP13.01□□□□□ -0.33
HDAC7-230ENST00000552960 TCF4P15884 667 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 TNNI1P19237 187 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 TTLL12Q14166 644 aaPredicted RBP13.01□□□□□ -0.33
HDAC7-230ENST00000552960 CCNG2Q16589 344 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 SUPT20HL1Q3ZLR7 823 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 ARHGEF16Q5VV41 709 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 LRRC6Q86X45 466 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 CEP120Q8N960 986 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 INPP5DQ92835 1189 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 SLCO2A1Q92959 643 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 MIPEPQ99797 713 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 DDX50Q9BQ39 737 aaKnown RBP13.01□□□□□ -0.33
HDAC7-230ENST00000552960 FAM213AQ9BRX8 229 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 AS3MTQ9HBK9 375 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 C1orf112Q9NSG2 853 aa13.01□□□□□ -0.33
HDAC7-230ENST00000552960 HAUS5O94927 633 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms