RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 SMARCD1Q96GM5 515 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 OXCT2Q9BYC2 517 aaPredicted RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 MCOLN1Q9GZU1 580 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 IQCGQ9H095 443 aaKnown RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 SIK2Q9H0K1 926 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 DMAP1Q9NPF5 467 aaPredicted RBP8.22□□□□□ -1.09
LRP6-206ENST00000543091 PHF24Q9UPV7 400 aa8.22□□□□□ -1.09
LRP6-206ENST00000543091 RTN3O95197 1032 aaPredicted RBP8.21□□□□□ -1.09
LRP6-206ENST00000543091 CKBP12277 381 aa8.21□□□□□ -1.09
LRP6-206ENST00000543091 CST5P28325 142 aaPredicted RBP8.21□□□□□ -1.09
LRP6-206ENST00000543091 SERPINB6P35237 376 aa8.21□□□□□ -1.09
LRP6-206ENST00000543091 AVPR1AP37288 418 aa8.21□□□□□ -1.09
LRP6-206ENST00000543091 NDST1P52848 882 aa8.21□□□□□ -1.09
LRP6-206ENST00000543091 ATP11AP98196 1134 aa8.21□□□□□ -1.09
LRP6-206ENST00000543091 CDR2Q01850 454 aa8.21□□□□□ -1.09
LRP6-206ENST00000543091 SMARCB1Q12824 385 aa8.21□□□□□ -1.09
LRP6-206ENST00000543091 RHOT1Q8IXI2 618 aa8.21□□□□□ -1.09
LRP6-206ENST00000543091 IFT20Q8IY31 132 aa8.21□□□□□ -1.09
LRP6-206ENST00000543091 PPP1R13BQ96KQ4 1090 aa8.21□□□□□ -1.09
LRP6-206ENST00000543091 INSL6Q9Y581 213 aa8.21□□□□□ -1.09
LRP6-206ENST00000543091 SMIM28A0A1B0GU29 152 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 A0A1B0GUA9 196 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 FOXN3O00409 490 aaPredicted RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 F9P00740 461 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 ACRP10323 421 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 ZFXP17010 805 aaPredicted RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 CYP3A5P20815 502 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 SLC1A1P43005 524 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 GLUD2P49448 558 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 DEUP1Q05D60 604 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 NFIL3Q16649 462 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 CASC4Q6P4E1 433 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 LEKR1Q6ZMV7 388 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.21□□□□□ -1.1
LRP6-206ENST00000543091 NFKBIZQ9BYH8 718 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 STMN4Q9H169 189 aaPredicted RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 GNEQ9Y223 722 aaKnown RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 LRRC37AA6NMS7 1700 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 PGRMC1O00264 195 aaKnown RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 ADAMTS3O15072 1205 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 HSF2BPO75031 334 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 TJP3O95049 919 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 SYN1P17600 705 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 PMS1P54277 932 aaKnown RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 AMPD2Q01433 879 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 PIGHQ14442 188 aaPredicted RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 E2F5Q15329 346 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 ZRSR2Q15696 482 aaKnown RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 PSMD5Q16401 504 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 PABPC1LQ4VXU2 614 aaKnown RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 CEP120Q8N960 986 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 DYDC1Q8WWB3 177 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 CPA5Q8WXQ8 436 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 TTPALQ9BTX7 342 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 C11orf84Q9BUA3 381 aaPredicted RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 DHX35Q9H5Z1 703 aaKnown RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 BCAS3Q9H6U6 928 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 PCSK1NQ9UHG2 260 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 CDH9Q9ULB4 789 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 PITPNM1O00562 1244 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 ADRB2P07550 413 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 SSTR3P32745 418 aaPredicted RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 TNFSF9P41273 254 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 KPNA1P52294 538 aaPredicted RBP8.21□□□□□ -1.1
LRP6-206ENST00000543091 BSPRYQ5W0U4 402 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 SPOPLQ6IQ16 392 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 PPP1R21Q6ZMI0 780 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 CCDC91Q7Z6B0 441 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 GANCQ8TET4 914 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.21□□□□□ -1.11e-8■■□□□ 13.5
LRP6-206ENST00000543091 FLRT1Q9NZU1 646 aa8.21□□□□□ -1.1
LRP6-206ENST00000543091 FAM155AB1AL88 458 aaPredicted RBP8.2□□□□□ -1.1
LRP6-206ENST00000543091 TRIM66O15016 1216 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 FTCDO95954 541 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 NCAM1P13591 858 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 SLC11A2P49281 568 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 GUCY2FP51841 1108 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 MTA1Q13330 715 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 DRP2Q13474 957 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 FAM187BQ17R55 369 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 ZACNQ401N2 412 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 DARS2Q6PI48 645 aaKnown RBP8.2□□□□□ -1.1
LRP6-206ENST00000543091 ECHDC2Q86YB7 292 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 SLC35F6Q8N357 371 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 TOP6BLQ8N6T0 577 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 ATP6V0D2Q8N8Y2 350 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 GSDMBQ8TAX9 411 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 MAGOHBQ96A72 148 aaKnown RBP8.2□□□□□ -1.1
LRP6-206ENST00000543091 MFSD14AQ96MC6 490 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 TLR8Q9NR97 1041 aaKnown RBP8.2□□□□□ -1.1
LRP6-206ENST00000543091 SCN4AP35499 1836 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 TGFB1I1O43294 461 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 CREB3O43889 395 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 ZBED1O96006 694 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 MYL4P12829 197 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 RAP1GAPP47736 663 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 EPHB1P54762 984 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 DYNLT1P63172 113 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 SLC39A12Q504Y0 691 aa8.2□□□□□ -1.1
LRP6-206ENST00000543091 DCAF6Q58WW2 860 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms