RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 BHMT2Q9H2M3 363 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 NMRK1Q9NWW6 199 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 PHTF1Q9UMS5 762 aa5.51□□□□□ -1.53
PROM1-220ENST00000540805 FRMPD4Q14CM0 1322 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 MROH7Q68CQ1 1323 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 TCRBV7S2A1N4TA0A589 114 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 FAM47DPA6NHR8 397 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 TCEA3O75764 348 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 PYGMP11217 842 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 ITIH2P19823 946 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 PTPN4P29074 926 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 HOXD13P35453 343 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 STAT3P40763 770 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 GPC5P78333 572 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 KYNUQ16719 465 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 FAM160B1Q5W0V3 765 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 RYBPQ8N488 228 aaPredicted RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 TTC30BQ8N4P2 665 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 CFAP61Q8NHU2 1237 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 NRG4Q8WWG1 115 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 SLC7A6OSQ96CW6 309 aaPredicted RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 DYDC2Q96IM9 177 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 POP1Q99575 1024 aaKnown RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 DENND2DQ9H6A0 471 aaPredicted RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 NINJ2Q9NZG7 142 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 ZNRF3Q9ULT6 936 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.5□□□□□ -1.53
PROM1-220ENST00000540805 AFG3L2Q9Y4W6 797 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 COL11A1P12107 1806 aaPredicted RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 RASA4BC9J798 803 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 MEIS2O14770 477 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 RASA4O43374 803 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 HNRNPCL1O60812 293 aaKnown RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 FTLP02792 175 aaPredicted RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 BCRP11274 1271 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 ZNF24P17028 368 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 ATF7P17544 494 aaPredicted RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 SAT1P21673 171 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 NEK3P51956 506 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 MYL7Q01449 175 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 CAV1Q03135 178 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 DNAJC3Q13217 504 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 Q4G0T1 1027 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 SGO2Q562F6 1265 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 TWF2Q6IBS0 349 aaKnown RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 RHBDF2Q6PJF5 856 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 SCARA5Q6ZMJ2 495 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 TMEM179Q6ZVK1 233 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 RBM12BQ8IXT5 1001 aaKnown RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 MBOAT7Q96N66 472 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 GPR88Q9GZN0 384 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 LRRC19Q9H756 370 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 PFDN4Q9NQP4 134 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 C1orf112Q9NSG2 853 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 ARHGEF38Q9NXL2 777 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 HSFX1Q9UBD0 423 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 APEX2Q9UBZ4 518 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 NAALADL1Q9UQQ1 740 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 WDR81Q562E7 1941 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 K7ERI5 159 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 NDUFB5O43674 189 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 CREB3O43889 395 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 STK10O94804 968 aaKnown RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 CBX6O95503 412 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 EGFRP00533 1210 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 FAM200BP0CF97 657 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 ATF2P15336 505 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 TAL1P17542 331 aaPredicted RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 GMPSP49915 693 aaPredicted RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 ITGA8P53708 1063 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 CDR2Q01850 454 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 SPIRE1Q08AE8 756 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 MOGSQ13724 837 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 SPARCL1Q14515 664 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 STAT4Q14765 748 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 SIX1Q15475 284 aaPredicted RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 RASIP1Q5U651 963 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 ZC3H18Q86VM9 953 aaKnown RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 SLFN12Q8IYM2 578 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 NME8Q8N427 588 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 RIBC1Q8N443 379 aaPredicted RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 SYT2Q8N9I0 419 aaPredicted RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 PPFIBP2Q8ND30 876 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 GSDMBQ8TAX9 411 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 GRK7Q8WTQ7 553 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 SLC20A1Q8WUM9 679 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 LENG9Q96B70 501 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 FAM136AQ96C01 138 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 DTNBP1Q96EV8 351 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 KMT5AQ9NQR1 393 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 INIPQ9NRY2 104 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.5□□□□□ -1.53
PROM1-220ENST00000540805 ZFP69BQ9UJL9 534 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 DOCK1Q14185 1865 aa5.5□□□□□ -1.53
PROM1-220ENST00000540805 OTOFQ9HC10 1997 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 PNMA6FA0A0J9YX94 578 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 SPDYE2BA6NHP3 402 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 RSPH10B2B2RC85 870 aa5.49□□□□□ -1.53
PROM1-220ENST00000540805 TRAFD1O14545 582 aaPredicted RBP5.49□□□□□ -1.53
PROM1-220ENST00000540805 MAGEB2O15479 319 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms