RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 FMO1Q01740 532 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 BMS1Q14692 1282 aaKnown RBP12.16□□□□□ -0.46
FAM60A-206ENST00000539409 SLC18A3Q16572 532 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 SPOUT1Q5T280 376 aaKnown RBP12.16□□□□□ -0.46
FAM60A-206ENST00000539409 ACOT1Q86TX2 421 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 ZNF677Q86XU0 584 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 SLC30A5Q8TAD4 765 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 SPATA18Q8TC71 538 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
FAM60A-206ENST00000539409 ZNF558Q96NG5 402 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 RAD9AQ99638 391 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 DDX43Q9NXZ2 648 aaKnown RBP12.16□□□□□ -0.46
FAM60A-206ENST00000539409 PUF60Q9UHX1 559 aaKnown RBP12.16□□□□□ -0.46
FAM60A-206ENST00000539409 ARHGEF37A1IGU5 675 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 EIF3CLB5ME19 914 aaKnown RBP12.16□□□□□ -0.46
FAM60A-206ENST00000539409 THAP12O43422 761 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 LCA5LO95447 670 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 EFEMP2O95967 443 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 PDGFRBP09619 1106 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 TKTP29401 623 aaKnown RBP12.16□□□□□ -0.46
FAM60A-206ENST00000539409 LHX1P48742 406 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 SHHQ15465 462 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 FUT10Q6P4F1 479 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 VPS36Q86VN1 386 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 COLGALT1Q8NBJ5 622 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 ZNF606Q8WXB4 792 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 IGSF21Q96ID5 467 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 RNPC3Q96LT9 517 aaKnown RBP12.16□□□□□ -0.46
FAM60A-206ENST00000539409 EIF3CQ99613 913 aaKnown RBP12.16□□□□□ -0.46
FAM60A-206ENST00000539409 RTP3Q9BQQ7 232 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.16□□□□□ -0.46
FAM60A-206ENST00000539409 NENFQ9UMX5 172 aa12.16□□□□□ -0.46
FAM60A-206ENST00000539409 REXO2Q9Y3B8 237 aaKnown RBP12.16□□□□□ -0.46
FAM60A-206ENST00000539409 LCHNA4D1U4 455 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 SYN3O14994 580 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 TLL1O43897 1013 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 CFHP08603 1231 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 CD19P15391 556 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 ACAT1P24752 427 aaKnown RBP12.15□□□□□ -0.46
FAM60A-206ENST00000539409 FAM171A1Q5VUB5 890 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 KIAA0319Q5VV43 1072 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 CRYBG2Q8N1P7 616 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 SLC39A11Q8N1S5 342 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 FIBCD1Q8N539 461 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 C12orf29Q8N999 325 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 ACRBPQ8NEB7 543 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 HEXIM2Q96MH2 286 aaKnown RBP12.15□□□□□ -0.46
FAM60A-206ENST00000539409 PCDHB18PQ96TA0 734 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 VN1R3Q9BXE9 311 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 FGFR3P22607 806 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 PSMC1P62191 440 aaKnown RBP12.15□□□□□ -0.46
FAM60A-206ENST00000539409 CYP27A1Q02318 531 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 ELAVL2Q12926 359 aaKnown RBP12.15□□□□□ -0.46
FAM60A-206ENST00000539409 CCDC142Q17RM4 750 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 OVOS1Q6IE37 1185 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 METTL23Q86XA0 190 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 B3GALNT2Q8NCR0 500 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 CLP1Q92989 425 aaKnown RBP12.15□□□□□ -0.46
FAM60A-206ENST00000539409 B3GALT6Q96L58 329 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 GDF15Q99988 308 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 LPIN3Q9BQK8 851 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 SEPT11Q9NVA2 429 aaKnown RBP12.15□□□□□ -0.46
FAM60A-206ENST00000539409 NAGPAQ9UK23 515 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 KIAA1257Q9ULG3 409 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 ADGRG1Q9Y653 693 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 GBF1Q92538 1859 aa12.15□□□□□ -0.46
FAM60A-206ENST00000539409 H0YGN5 161 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 O00370 1275 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 VDRP11473 427 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 TNFAIP3P21580 790 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 SSTR3P32745 418 aaPredicted RBP12.14□□□□□ -0.47
FAM60A-206ENST00000539409 YWHAHQ04917 246 aaPredicted RBP12.14□□□□□ -0.47
FAM60A-206ENST00000539409 SGO2Q562F6 1265 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 FAM109BQ6ICB4 259 aaPredicted RBP12.14□□□□□ -0.47
FAM60A-206ENST00000539409 HOMEZQ8IX15 550 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 RNF168Q8IYW5 571 aaPredicted RBP12.14□□□□□ -0.47
FAM60A-206ENST00000539409 OR10T2Q8NGX3 314 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 KIAA1524Q8TCG1 905 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 TNIP3Q96KP6 325 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 PCDHGC3Q9UN70 934 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 CHD9Q3L8U1 2897 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 CARNS1A5YM72 827 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 ATP2C2O75185 946 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 OAZ2O95190 189 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 PCSK1P29120 753 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 RABGGTBP53611 331 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 VARS2Q5ST30 1063 aaKnown RBP12.14□□□□□ -0.47
FAM60A-206ENST00000539409 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.14□□□□□ -0.47
FAM60A-206ENST00000539409 SYT15Q9BQS2 421 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 FAM49BQ9NUQ9 324 aa12.14□□□□□ -0.47
FAM60A-206ENST00000539409 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.14□□□□□ -0.47
FAM60A-206ENST00000539409 NLRC5Q86WI3 1866 aa12.13□□□□□ -0.47
FAM60A-206ENST00000539409 MED7O43513 233 aa12.13□□□□□ -0.47
FAM60A-206ENST00000539409 IPO7O95373 1038 aaKnown RBP12.13□□□□□ -0.47
FAM60A-206ENST00000539409 SPA17Q15506 151 aa12.13□□□□□ -0.47
FAM60A-206ENST00000539409 RTP2Q5QGT7 225 aa12.13□□□□□ -0.47
FAM60A-206ENST00000539409 ALKBH5Q6P6C2 394 aaKnown RBP12.13□□□□□ -0.47
FAM60A-206ENST00000539409 TAS1R1Q7RTX1 841 aa12.13□□□□□ -0.47
FAM60A-206ENST00000539409 PASD1Q8IV76 773 aa12.13□□□□□ -0.47
FAM60A-206ENST00000539409 ACBD6Q9BR61 282 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms