RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 IL1R1P14778 569 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 EGR1P18146 543 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 KIR3DL1P43629 444 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 GPR15P49685 360 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 EPHA5P54756 1037 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 ALDH18A1P54886 795 aaKnown RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 RPS3AP61247 264 aaKnown RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 TLE1Q04724 770 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 TARDBPQ13148 414 aaKnown RBP eCLIP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 DCTN2Q13561 401 aaKnown RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 SF3B3Q15393 1217 aaKnown RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 ADIPOQQ15848 244 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 TRIM71Q2Q1W2 868 aaKnown RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 TMTC4Q5T4D3 741 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 SFRP5Q5T4F7 317 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 DEPDC1Q5TB30 811 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 PRAMEF18Q5VWM3 479 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 NAA35Q5VZE5 725 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 INTS5Q6P9B9 1019 aaKnown RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 USP17L6PQ6QN14 398 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 CYP20A1Q6UW02 462 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 C20orf204Q6ZNR8 217 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 USP51Q70EK9 711 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 GAREM2Q75VX8 874 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 RAB11FIP2Q7L804 512 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 NUP54Q7Z3B4 507 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 RBM12BQ8IXT5 1001 aaKnown RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 YAF2Q8IY57 180 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 GPR156Q8NFN8 814 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 SPATA18Q8TC71 538 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 STAMQ92783 540 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 GBP5Q96PP8 586 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 USP44Q9H0E7 712 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 BRD8Q9H0E9 1235 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 RNF208Q9H0X6 261 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 PCDHAC1Q9H158 963 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 MRPL46Q9H2W6 279 aaKnown RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 TP63Q9H3D4 680 aaPredicted RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 NDST4Q9H3R1 872 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 HEYLQ9NQ87 328 aaPredicted RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 TBCCD1Q9NVR7 557 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 HCFC1R1Q9NWW0 138 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 ADPRHL2Q9NX46 363 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 TAS2R10Q9NYW0 307 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 RABL2AQ9UBK7 228 aaPredicted RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 GULP1Q9UBP9 304 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 ZMYND8Q9ULU4 1186 aaPredicted RBP4.98□□□□□ -1.61
C11orf54-213ENST00000533585 HDAC5Q9UQL6 1122 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 NAALADL1Q9UQQ1 740 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 STARD13Q9Y3M8 1113 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 PCDHB6Q9Y5E3 794 aa4.98□□□□□ -1.61
C11orf54-213ENST00000533585 MBD3L4A6NDZ8 208 aaPredicted RBP4.97□□□□□ -1.61
C11orf54-213ENST00000533585 MBD3L3A6NE82 208 aaPredicted RBP4.97□□□□□ -1.61
C11orf54-213ENST00000533585 KLK10O43240 276 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 AKR1B10O60218 316 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 NRP2O60462 931 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 FMO6PO60774 539 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 FKTNO75072 461 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 TBX10O75333 385 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 SLC22A3O75751 556 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 RASSF9O75901 435 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 GLP2RO95838 553 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 FUCA1P04066 466 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 UBL4AP11441 157 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 RAB6AP20340 208 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 ENDOUP21128 410 aaKnown RBP4.97□□□□□ -1.61
C11orf54-213ENST00000533585 FGFR4P22455 802 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 KLRC1P26715 233 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 MAPK3P27361 379 aaPredicted RBP4.97□□□□□ -1.61
C11orf54-213ENST00000533585 IL1R2P27930 398 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 PRDX5P30044 214 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 GCH1P30793 250 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 GGT5P36269 586 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 RGS2P41220 211 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 ZNF41P51814 821 aaPredicted RBP4.97□□□□□ -1.61
C11orf54-213ENST00000533585 PPP5CP53041 499 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 CSE1LP55060 971 aaKnown RBP4.97□□□□□ -1.61
C11orf54-213ENST00000533585 NRG3P56975 720 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 HERVK_113P62684 666 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 AKAP17AQ02040 695 aaKnown RBP4.97□□□□□ -1.61
C11orf54-213ENST00000533585 EXOSC9Q06265 439 aaKnown RBP4.97□□□□□ -1.61
C11orf54-213ENST00000533585 CTBP1Q13363 440 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 RPS6KA2Q15349 733 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 CCDC178Q5BJE1 867 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 TCP11X2Q5H9J9 407 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 MROH9Q5TGP6 573 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 CRTC1Q6UUV9 634 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 KRT28Q7Z3Y7 464 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 ZNF804AQ7Z570 1209 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 ULK2Q8IYT8 1036 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 MPP5Q8N3R9 675 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 TOP6BLQ8N6T0 577 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 C2CD4AQ8NCU7 369 aaPredicted RBP4.97□□□□□ -1.61
C11orf54-213ENST00000533585 LINC00116Q8NCU8 138 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 Q8NFD4 153 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 ETNPPLQ8TBG4 499 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 CPT1CQ8TCG5 803 aa4.97□□□□□ -1.61
C11orf54-213ENST00000533585 SH3RF3Q8TEJ3 882 aaPredicted RBP4.97□□□□□ -1.61
C11orf54-213ENST00000533585 CFHR4Q92496 578 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms