RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 INTS6LQ5JSJ4 861 aaKnown RBP17.09■□□□□ 0.33
SSBP1-214ENST00000498107 SPOPLQ6IQ16 392 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 CES5AQ6NT32 575 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 CYP26C1Q6V0L0 522 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 SCARA5Q6ZMJ2 495 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 GBP6Q6ZN66 633 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 UNC93AQ86WB7 457 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 EHBP1Q8NDI1 1231 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 CMASQ8NFW8 434 aaPredicted RBP17.09■□□□□ 0.33
SSBP1-214ENST00000498107 OR10T2Q8NGX3 314 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 NT5C1BQ96P26 610 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 RTP3Q9BQQ7 232 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 MRPL45Q9BRJ2 306 aaKnown RBP17.09■□□□□ 0.33
SSBP1-214ENST00000498107 BCO2Q9BYV7 579 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 NDST4Q9H3R1 872 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 SMYD3Q9H7B4 428 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 ZDHHC7Q9NXF8 308 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 CLEC1BQ9P126 229 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 HSFX1Q9UBD0 423 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 PLXNA3P51805 1871 aa17.09■□□□□ 0.33
SSBP1-214ENST00000498107 A8MXQ7 604 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 PES1O00541 588 aaKnown RBP17.08■□□□□ 0.32
SSBP1-214ENST00000498107 PRRG1O14668 218 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 ZMYND10O75800 440 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 HNRNPA1P09651 372 aaKnown RBP eCLIP17.08■□□□□ 0.32
SSBP1-214ENST00000498107 SPATA31D3P0C874 917 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 HOXA9P31269 272 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 RBM10P98175 930 aaKnown RBP17.08■□□□□ 0.32
SSBP1-214ENST00000498107 ADCY1Q08828 1119 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 NCAPHQ15003 741 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 LEXMQ3ZCV2 418 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 SLC39A12Q504Y0 691 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 SPATA31D4Q6ZUB0 917 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 OSTM1Q86WC4 334 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 TCEAL8Q8IYN2 117 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 SPPL2BQ8TCT7 592 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 ATXN2LQ8WWM7 1075 aaKnown RBP17.08■□□□□ 0.32
SSBP1-214ENST00000498107 MSLNLQ96KJ4 702 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 TNIP3Q96KP6 325 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 FAM81BQ96LP2 452 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 SYT15Q9BQS2 421 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 CYP4F11Q9HBI6 524 aa17.08■□□□□ 0.32
SSBP1-214ENST00000498107 APOBEC3GQ9HC16 384 aaKnown RBP17.08■□□□□ 0.32
SSBP1-214ENST00000498107 H3BQ06 376 aaPredicted RBP17.07■□□□□ 0.32
SSBP1-214ENST00000498107 C8AP07357 584 aa17.07■□□□□ 0.32
SSBP1-214ENST00000498107 PDGFRBP09619 1106 aa17.07■□□□□ 0.32
SSBP1-214ENST00000498107 OR4Q2P0C623 313 aa17.07■□□□□ 0.32
SSBP1-214ENST00000498107 DLX2Q07687 328 aaPredicted RBP17.07■□□□□ 0.32
SSBP1-214ENST00000498107 PLD1Q13393 1074 aa17.07■□□□□ 0.32
SSBP1-214ENST00000498107 PPM1LQ5SGD2 360 aa17.07■□□□□ 0.32
SSBP1-214ENST00000498107 RNF19BQ6ZMZ0 732 aa17.07■□□□□ 0.32
SSBP1-214ENST00000498107 C4orf50Q6ZRC1 276 aa17.07■□□□□ 0.32
SSBP1-214ENST00000498107 RHOBTB2Q9BYZ6 727 aa17.07■□□□□ 0.32
SSBP1-214ENST00000498107 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.07■□□□□ 0.323e-8■■■■■ 34.9
SSBP1-214ENST00000498107 GCNT4Q9P109 453 aa17.07■□□□□ 0.32
SSBP1-214ENST00000498107 PCDHB5Q9Y5E4 795 aa17.07■□□□□ 0.32
SSBP1-214ENST00000498107 MTMR11A4FU01 709 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 GOLGA6L19H0YKK7 550 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 XYLBO75191 536 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 LRG1P02750 347 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 POU2F2P09086 479 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 WEE2P0C1S8 567 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 ZNF18P17022 549 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 ACAT1P24752 427 aaKnown RBP17.06■□□□□ 0.32
SSBP1-214ENST00000498107 LMO2P25791 158 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 TUFMP49411 452 aaKnown RBP17.06■□□□□ 0.32
SSBP1-214ENST00000498107 CDH8P55286 799 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 MRPS5P82675 430 aaKnown RBP17.06■□□□□ 0.32
SSBP1-214ENST00000498107 INCA1Q0VD86 236 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 SMAD4Q13485 552 aaKnown RBP17.06■□□□□ 0.32
SSBP1-214ENST00000498107 CUL2Q13617 745 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 KRT31Q15323 416 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 EXOC3L4Q17RC7 722 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 FKBP15Q5T1M5 1219 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 SYCE2Q6PIF2 218 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 LRSAM1Q6UWE0 723 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 DHX40Q8IX18 779 aaKnown RBP17.06■□□□□ 0.32
SSBP1-214ENST00000498107 SMRP1Q8NCR6 262 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 LMO3Q8TAP4 145 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 SLC7A14Q8TBB6 771 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 FAM200AQ8TCP9 573 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 FUBP3Q96I24 572 aaKnown RBP eCLIP17.06■□□□□ 0.32
SSBP1-214ENST00000498107 RIPOR3Q96MK2 946 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 TMEM209Q96SK2 561 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 INTS2Q9H0H0 1204 aaKnown RBP17.06■□□□□ 0.32
SSBP1-214ENST00000498107 ADAM7Q9H2U9 754 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 ABCB6Q9NP58 842 aa17.06■□□□□ 0.32
SSBP1-214ENST00000498107 LIMA1Q9UHB6 759 aaKnown RBP17.06■□□□□ 0.32
SSBP1-214ENST00000498107 CCDC195A0A1B0GUA6 201 aa17.05■□□□□ 0.32
SSBP1-214ENST00000498107 LRRN2O75325 713 aa17.05■□□□□ 0.32
SSBP1-214ENST00000498107 PAPLNO95428 1278 aa17.05■□□□□ 0.32
SSBP1-214ENST00000498107 PTPN1P18031 435 aaKnown RBP17.05■□□□□ 0.32
SSBP1-214ENST00000498107 MTHFRP42898 656 aa17.05■□□□□ 0.32
SSBP1-214ENST00000498107 RAP1GAPP47736 663 aa17.05■□□□□ 0.32
SSBP1-214ENST00000498107 ALDH1A3P47895 512 aa17.05■□□□□ 0.32
SSBP1-214ENST00000498107 GCNT1Q02742 428 aa17.05■□□□□ 0.32
SSBP1-214ENST00000498107 LRMPQ12912 555 aa17.05■□□□□ 0.32
SSBP1-214ENST00000498107 IQCB1Q15051 598 aa17.05■□□□□ 0.32
SSBP1-214ENST00000498107 MIIPQ5JXC2 388 aa17.05■□□□□ 0.32
SSBP1-214ENST00000498107 ATAT1Q5SQI0 421 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms