RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	CELA2A	P08217	269 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	ZFX	P17010	805 aa	Predicted RBP	4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	ANAPC15	P60006	121 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	KRT85	P78386	507 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	DSC2	Q02487	901 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	ODF1	Q14990	250 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	TBCC	Q15814	346 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	EZH2	Q15910	746 aa	Known RBP	4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	RBM20	Q5T481	1227 aa	Known RBP	4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	GORAB	Q5T7V8	394 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	TNPO1	Q92973	898 aa	Known RBP	4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	RFK	Q969G6	155 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	OSBPL9	Q96SU4	736 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	CNPPD1	Q9BV87	410 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	C1orf43	Q9BWL3	253 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	SIK2	Q9H0K1	926 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	PRDM16	Q9HAZ2	1276 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	MRPS18A	Q9NVS2	196 aa	Known RBP	4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	RLIM	Q9NVW2	624 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	ETAA1	Q9NY74	926 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	KLHL42	Q9P2K6	505 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	DKK3	Q9UBP4	350 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	POLH	Q9Y253	713 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	NOP58	Q9Y2X3	529 aa	Known RBP	4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	PCDHA3	Q9Y5H8	950 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	RAD54B	Q9Y620	910 aa		4.27	□□□□□ -1.73
VPS36-205	ENST00000492650	FZD9	O00144	591 aa		4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	SOAT2	O75908	522 aa		4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	KIF20A	O95235	890 aa		4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	NDUFB7	P17568	137 aa		4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	CD6	P30203	668 aa		4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	PIK3CG	P48736	1102 aa		4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	EIF2B5	Q13144	721 aa	Known RBP	4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	BMPR2	Q13873	1038 aa		4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	LLGL1	Q15334	1064 aa		4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	ZCRB1	Q8TBF4	217 aa	Known RBP	4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	FAM136A	Q96C01	138 aa		4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	GPR35	Q9HC97	309 aa		4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	AGAP1	Q9UPQ3	857 aa		4.26	□□□□□ -1.73
VPS36-205	ENST00000492650	PRSS29P	A6NIE9	313 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	ARIH2	O95376	493 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	PARN	O95453	639 aa	Known RBP	4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	GNAI2	P04899	355 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	FAM163B	P0C2L3	166 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	RARB	P10826	455 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	DRD4	P21917	467 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	PRDX5	P30044	214 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	CDKN1C	P49918	316 aa	Predicted RBP	4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	EVA1C	P58658	441 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	SLC10A2	Q12908	348 aa	Predicted RBP	4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	KIF22	Q14807	665 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	THEMIS2	Q5TEJ8	643 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	ZNF551	Q7Z340	670 aa	Predicted RBP	4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	USP37	Q86T82	979 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	EXOC8	Q8IYI6	725 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	VGLL2	Q8N8G2	317 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	SEMA6D	Q8NFY4	1073 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	ATRIP	Q8WXE1	791 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	C1QTNF7	Q9BXJ2	289 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	ARHGEF3	Q9NR81	526 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	SH3BP4	Q9P0V3	963 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	ZNF70	Q9UC06	446 aa	Predicted RBP	4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	ABCF2	Q9UG63	623 aa		4.25	□□□□□ -1.73
VPS36-205	ENST00000492650	TNKS	O95271	1327 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	LINC01548	A6NM66	108 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	TARM1	B6A8C7	271 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650		M0QYG6	137 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	NXPH3	O95157	252 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	PDHA1	P08559	390 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	FTH1P19	P0C7X4	201 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	GCLC	P48506	637 aa	Predicted RBP	4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	ALDH9A1	P49189	494 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	TFF2	Q03403	129 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	MTX3	Q5HYI7	312 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	VPS53	Q5VIR6	699 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	CEP85	Q6P2H3	762 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	C1QL2	Q7Z5L3	287 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	CPA6	Q8N4T0	437 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	PRPF38A	Q8NAV1	312 aa	Known RBP	4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	SERTAD4	Q9NUC0	356 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	FLRT1	Q9NZU1	646 aa		4.24	□□□□□ -1.73
VPS36-205	ENST00000492650	ALG1L2	C9J202	215 aa		4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	PPM1D	O15297	605 aa		4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	SLC16A6	O15403	523 aa		4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	DTNB	O60941	627 aa		4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	FTL	P02792	175 aa	Predicted RBP	4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	PRR35	P0CG20	571 aa		4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	PDC	P20941	246 aa		4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	NOG	Q13253	232 aa		4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	HSP90AB2P	Q58FF8	381 aa		4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	ZNF425	Q6IV72	752 aa		4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	TMEM108	Q6UXF1	575 aa		4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	HEATR3	Q7Z4Q2	680 aa		4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	FAM90A1	Q86YD7	464 aa		4.23	□□□□□ -1.73
VPS36-205	ENST00000492650	FANCB	Q8NB91	859 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms