RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 FAM26FQ5R3K3 315 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 TPRG1Q6ZUI0 275 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 DNAJB7Q7Z6W7 309 aaPredicted RBP8.04□□□□□ -1.12
CPNE1-226ENST00000486021 SPATA2LQ8IUW3 424 aaPredicted RBP8.04□□□□□ -1.12
CPNE1-226ENST00000486021 WDR49Q8IV35 697 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 ZSCAN18Q8TBC5 510 aaPredicted RBP8.04□□□□□ -1.12
CPNE1-226ENST00000486021 ZNF507Q8TCN5 953 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 ATRIPQ8WXE1 791 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 FAM3CQ92520 227 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 SYAP1Q96A49 352 aaPredicted RBP8.04□□□□□ -1.12
CPNE1-226ENST00000486021 PGLYRP2Q96PD5 576 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 FIZ1Q96SL8 496 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 SEPT5Q99719 369 aaPredicted RBP8.04□□□□□ -1.12
CPNE1-226ENST00000486021 C7orf25Q9BPX7 421 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 HINFPQ9BQA5 517 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 KXD1Q9BQD3 176 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 STRA6Q9BX79 667 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 GTPBP4Q9BZE4 634 aaKnown RBP8.04□□□□□ -1.12
CPNE1-226ENST00000486021 TRIM9Q9C026 710 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 HAPLN2Q9GZV7 340 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 SCAND2PQ9GZW5 306 aaPredicted RBP8.04□□□□□ -1.12
CPNE1-226ENST00000486021 ABCB6Q9NP58 842 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 LTB4R2Q9NPC1 389 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 SPATA6Q9NWH7 488 aaPredicted RBP8.04□□□□□ -1.12
CPNE1-226ENST00000486021 GDAP2Q9NXN4 497 aa8.04□□□□□ -1.12
CPNE1-226ENST00000486021 TFIP11Q9UBB9 837 aaKnown RBP8.04□□□□□ -1.12
CPNE1-226ENST00000486021 TIMM13Q9Y5L4 95 aaPredicted RBP8.04□□□□□ -1.12
CPNE1-226ENST00000486021 GREB1Q4ZG55 1949 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 RALGAPA1Q6GYQ0 2036 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 A0A1W2PRU2 124 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 TRIM66O15016 1216 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 POLR2DO15514 142 aaKnown RBP8.03□□□□□ -1.12
CPNE1-226ENST00000486021 PHACTR2O75167 634 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 SEC24AO95486 1093 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 CEBPBP17676 345 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 POLR2BP30876 1174 aaKnown RBP8.03□□□□□ -1.12
CPNE1-226ENST00000486021 GDI1P31150 447 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 ATICP31939 592 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 CCR3P51677 355 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 TNNC1P63316 161 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 GPR158Q5T848 1215 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 TANGO2Q6ICL3 276 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 SLC39A4Q6P5W5 647 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 USP49Q70CQ1 688 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 RALGPS2Q86X27 583 aaPredicted RBP8.03□□□□□ -1.12
CPNE1-226ENST00000486021 SYNPOQ8N3V7 929 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 CELF5Q8N6W0 485 aaKnown RBP8.03□□□□□ -1.12
CPNE1-226ENST00000486021 XXYLT1Q8NBI6 393 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 CCDC150Q8NCX0 1101 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 BPIFB1Q8TDL5 484 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 SPATA32Q96LK8 384 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 MMS19Q96T76 1030 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 DDX23Q9BUQ8 820 aaKnown RBP8.03□□□□□ -1.12
CPNE1-226ENST00000486021 SNX25Q9H3E2 840 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 PCIF1Q9H4Z3 704 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 TASP1Q9H6P5 420 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 ZNF334Q9HCZ1 680 aaPredicted RBP8.03□□□□□ -1.12
CPNE1-226ENST00000486021 EXOC1Q9NV70 894 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 INTS13Q9NVM9 706 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 DDX43Q9NXZ2 648 aaKnown RBP8.03□□□□□ -1.12
CPNE1-226ENST00000486021 ABI2Q9NYB9 513 aaPredicted RBP8.03□□□□□ -1.12
CPNE1-226ENST00000486021 CEP72Q9P209 647 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 MAGEC2Q9UBF1 373 aaPredicted RBP8.03□□□□□ -1.12
CPNE1-226ENST00000486021 HOOK1Q9UJC3 728 aaKnown RBP8.03□□□□□ -1.12
CPNE1-226ENST00000486021 CDH9Q9ULB4 789 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 SNX9Q9Y5X1 595 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 ANAPC1Q9H1A4 1944 aa8.03□□□□□ -1.12
CPNE1-226ENST00000486021 PTPRDP23468 1912 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 GOLGA6L4A6NEF3 574 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 HEPACAM2A8MVW5 462 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 CALUO43852 315 aaPredicted RBP8.02□□□□□ -1.13
CPNE1-226ENST00000486021 FOXD2O60548 495 aaPredicted RBP8.02□□□□□ -1.13
CPNE1-226ENST00000486021 EXOC3O60645 756 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 ATG13O75143 517 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 DCNP07585 359 aaKnown RBP8.02□□□□□ -1.13
CPNE1-226ENST00000486021 HAPLN1P10915 354 aaPredicted RBP8.02□□□□□ -1.13
CPNE1-226ENST00000486021 RPL13P26373 211 aaKnown RBP8.02□□□□□ -1.13
CPNE1-226ENST00000486021 CNR2P34972 360 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 TEAD2Q15562 447 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 SNRNP35Q16560 246 aaKnown RBP8.02□□□□□ -1.13
CPNE1-226ENST00000486021 KNOP1Q1ED39 458 aaKnown RBP8.02□□□□□ -1.13
CPNE1-226ENST00000486021 SLC5A9Q2M3M2 681 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 CFAP221Q4G0U5 840 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 PREPLQ4J6C6 727 aaPredicted RBP8.02□□□□□ -1.13
CPNE1-226ENST00000486021 INTS6LQ5JSJ4 861 aaKnown RBP8.02□□□□□ -1.13
CPNE1-226ENST00000486021 FAM78AQ5JUQ0 283 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 WSCD1Q658N2 575 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 FAM173BQ6P4H8 233 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 VSTM1Q6UX27 236 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 CRELD2Q6UXH1 353 aaPredicted RBP8.02□□□□□ -1.13
CPNE1-226ENST00000486021 MAMSTRQ6ZN01 415 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 NUDT18Q6ZVK8 323 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 ARID3BQ8IVW6 561 aaPredicted RBP8.02□□□□□ -1.13
CPNE1-226ENST00000486021 C12orf56Q8IXR9 622 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 ADGRF2Q8IZF7 708 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 SAAL1Q96ER3 474 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 HPDLQ96IR7 371 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 TNIP3Q96KP6 325 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 IMPG2Q9BZV3 1241 aa8.02□□□□□ -1.13
CPNE1-226ENST00000486021 SMOC2Q9H3U7 446 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms