RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 PPP2R5BQ15173 497 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 NR0B2Q15466 257 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 GPR68Q15743 365 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 INF2Q27J81 1249 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 C3orf36Q3SXR2 165 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 HSP90AB3PQ58FF7 597 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 EXOSC6Q5RKV6 272 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SLC9C2Q5TAH2 1124 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SNX30Q5VWJ9 437 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 GALNT17Q6IS24 598 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 RCSD1Q6JBY9 416 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 GDF6Q6KF10 455 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 ESRP1Q6NXG1 681 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CYP20A1Q6UW02 462 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 KDELC1Q6UW63 502 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 LIAT1Q6ZQX7 453 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 OTUD6AQ7L8S5 288 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 DGLUCYQ7Z3D6 616 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 RALYLQ86SE5 291 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 KRT73Q86Y46 540 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 DIS3L2Q8IYB7 885 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 THNSL1Q8IYQ7 743 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CCDC170Q8IYT3 715 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 ULK2Q8IYT8 1036 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 ADGRG2Q8IZP9 1017 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SRBD1Q8N5C6 995 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 C10orf53Q8N6V4 93 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 GOLGA6L1Q8N7Z2 621 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 KLHL23Q8NBE8 558 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 OR14C36Q8NHC7 312 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 MOSPD2Q8NHP6 518 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 UTP15Q8TED0 518 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 STYXQ8WUJ0 223 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 DEPDC1BQ8WUY9 529 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 BCL7CQ8WUZ0 217 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 KBTBD7Q8WVZ9 684 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF606Q8WXB4 792 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 RSC1A1Q92681 617 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 USP6NLQ92738 828 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 ATP6V0A1Q93050 837 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 C18orf8Q96DM3 657 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 FAM120BQ96EK7 910 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CDCA5Q96FF9 252 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 NOX5Q96PH1 765 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 PRPF18Q99633 342 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 NOL10Q9BSC4 688 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 ADI1Q9BV57 179 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 MXD3Q9BW11 206 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CD244Q9BZW8 370 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 NUCKS1Q9H1E3 243 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 KCTD10Q9H3F6 313 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 TAF1DQ9H5J8 278 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 ACAD9Q9H845 621 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 COPS7BQ9H9Q2 264 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 RC3H2Q9HBD1 1191 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CYP4F12Q9HCS2 524 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 INCENPQ9NQS7 918 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 KCNH7Q9NS40 1196 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 RXFP3Q9NSD7 469 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SACM1LQ9NTJ5 587 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 SEPT11Q9NVA2 429 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CRIM1Q9NZV1 1036 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CLEC1BQ9P126 229 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 RABL2AQ9UBK7 228 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 CPNE7Q9UBL6 633 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 UBA2Q9UBT2 640 aaPredicted RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 PCOLCE2Q9UKZ9 415 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 KCNH3Q9ULD8 1083 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 PCDHGB4Q9UN71 923 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 PHF24Q9UPV7 400 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 ZNF281Q9Y2X9 895 aa3.14□□□□□ -1.91
HMGN4-202ENST00000477243 DNMT1P26358 1616 aaKnown RBP3.14□□□□□ -1.91
HMGN4-202ENST00000477243 STAB1Q9NY15 2570 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 PIEZO2Q9H5I5 2752 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 PRSS38A1L453 326 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TTC24A2A3L6 582 aaPredicted RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 CCDC151A5D8V7 595 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 AQP12BA6NM10 295 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 FAM171A2A8MVW0 826 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 H0Y8X5 98 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 H7BY64 318 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 SMIM22K7EJ46 135 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TAF4O00268 1085 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 UBE2CO00762 179 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 SCDO00767 359 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 FSCN2O14926 492 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 KIAA0355O15063 1070 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 VILLO15195 856 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TXNL1O43396 289 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 BNIP3LO60238 219 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 TBC1D4O60343 1298 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 NOL3O60936 208 aaKnown RBP3.13□□□□□ -1.91
HMGN4-202ENST00000477243 SIN3BO75182 1162 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 PPFIA2O75334 1257 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 GUCY1B2O75343 617 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 SEC22BO75396 215 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ACTL6BO94805 426 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 ENDOD1O94919 500 aa3.13□□□□□ -1.91
HMGN4-202ENST00000477243 CCNDBP1O95273 360 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms