RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 KCND1Q9NSA2 647 aa14.46□□□□□ -0.1
BRAT1-203ENST00000467558 ZC3H7BQ9UGR2 993 aaKnown RBP14.46□□□□□ -0.1
BRAT1-203ENST00000467558 DDX3XO00571 662 aaKnown RBP eCLIP14.45□□□□□ -0.17e-8■□□□□ 9.7
BRAT1-203ENST00000467558 COPS2P61201 443 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 PRAMEP78395 509 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 MCL1Q07820 350 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 KYNUQ16719 465 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 IQSEC1Q6DN90 963 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 MTMR14Q8NCE2 650 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 PDCD6IPQ8WUM4 868 aaKnown RBP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 ZNF606Q8WXB4 792 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 TMEM134Q9H6X4 195 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 XPO7Q9UIA9 1087 aaKnown RBP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 IGKV6D-41A0A0C4DH26 115 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 SPAG6O75602 509 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 HOXC6P09630 235 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 MDH1P40925 334 aaKnown RBP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 PRKCIP41743 596 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 PTGER2P43116 358 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 GUCY1A3Q02108 690 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 CACNB2Q08289 660 aaPredicted RBP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 ZNF235Q14590 738 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 LRRC14Q15048 493 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 MIIPQ5JXC2 388 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 AGBL2Q5U5Z8 902 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 RNF219Q5W0B1 726 aaPredicted RBP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 ZNF449Q6P9G9 518 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 ARHGEF19Q8IW93 802 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 FBXO41Q8TF61 875 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 ZC3H15Q8WU90 426 aaKnown RBP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 TRAPPC12Q8WVT3 735 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 VCPIP1Q96JH7 1222 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 FRMD8Q9BZ67 464 aaPredicted RBP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 TRABDQ9H4I3 376 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 ITGA11Q9UKX5 1188 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 SMG5Q9UPR3 1016 aaKnown RBP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 ANKRD63C9JTQ0 380 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 ONECUT3O60422 494 aaPredicted RBP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 NOL3O60936 208 aaKnown RBP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 ATP9AO75110 1047 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 ALDH1A1P00352 501 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 ODC1P11926 461 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 MAGEA4P43358 317 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 OR6P1Q8NGX9 317 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 GRAMD1AQ96CP6 724 aa14.45□□□□□ -0.1
BRAT1-203ENST00000467558 FRMD8P1Q9BZ68 369 aaPredicted RBP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 DMGDHQ9UI17 866 aaKnown RBP14.45□□□□□ -0.1
BRAT1-203ENST00000467558 LRRIQ3A6PVS8 624 aaPredicted RBP14.44□□□□□ -0.1
BRAT1-203ENST00000467558 RBBP5Q15291 538 aaKnown RBP14.44□□□□□ -0.1
BRAT1-203ENST00000467558 SH3BP5LQ7L8J4 393 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 RAPGEF5Q92565 580 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 KRT35Q92764 455 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 ASTN1O14525 1302 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 LYPLA2O95372 231 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 NCAM1P13591 858 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 NCF2P19878 526 aaPredicted RBP14.44□□□□□ -0.1
BRAT1-203ENST00000467558 CLNS1AP54105 237 aaKnown RBP14.44□□□□□ -0.1
BRAT1-203ENST00000467558 BCAT1P54687 386 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 ORC1Q13415 861 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 BMT2Q1RMZ1 405 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 JADE1Q6IE81 842 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 TMEM161BQ8NDZ6 487 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 SLC13A1Q9BZW2 595 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 VAV3Q9UKW4 847 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 FIS1Q9Y3D6 152 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 SPATA31C2B4DYI2 1134 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 PSMD3O43242 534 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 MTSS1O43312 755 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 ATP9BO43861 1147 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 MKRN4PQ13434 485 aaPredicted RBP14.44□□□□□ -0.1
BRAT1-203ENST00000467558 ACVR2BQ13705 512 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 AMHR2Q16671 573 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 TFDP3Q5H9I0 405 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 CELF3Q5SZQ8 465 aaKnown RBP14.44□□□□□ -0.1
BRAT1-203ENST00000467558 TAF2Q6P1X5 1199 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 ZNF410Q86VK4 478 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 NUDCD3Q8IVD9 361 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 MCOLN2Q8IZK6 566 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 EXD1Q8NHP7 514 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 TTC8Q8TAM2 541 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 ALKBH8Q96BT7 664 aaKnown RBP14.44□□□□□ -0.1
BRAT1-203ENST00000467558 ZBTB45Q96K62 511 aaPredicted RBP14.44□□□□□ -0.1
BRAT1-203ENST00000467558 AGAP3Q96P47 875 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 L1RE1Q9UN81 338 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 CHEK2O96017 543 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 THP07101 528 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 FBXO47Q5MNV8 452 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 OR2W6PQ8NHA6 318 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 THOC1Q96FV9 657 aaKnown RBP14.44□□□□□ -0.1
BRAT1-203ENST00000467558 DDX50Q9BQ39 737 aaKnown RBP14.44□□□□□ -0.1
BRAT1-203ENST00000467558 CNPY3Q9BT09 278 aa14.44□□□□□ -0.1
BRAT1-203ENST00000467558 PPARGC1AQ9UBK2 798 aaKnown RBP14.44□□□□□ -0.1
BRAT1-203ENST00000467558 ATP5HO75947 161 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 PPP3CAQ08209 521 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 LONRF1Q17RB8 773 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 ANO4Q32M45 955 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 SLC27A1Q6PCB7 646 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 NT5DC4Q86YG4 428 aa14.43□□□□□ -0.1
BRAT1-203ENST00000467558 CASKIN2Q8WXE0 1202 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms