RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 CCL15Q16663 113 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 KIZQ2M2Z5 673 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 CCDC183Q5T5S1 534 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 SNRNP48Q6IEG0 339 aaKnown RBP5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 PDXDC1Q6P996 788 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 MOXD1Q6UVY6 613 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 C20orf204Q6ZNR8 217 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 CCDC73Q6ZRK6 1079 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 USP49Q70CQ1 688 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 CREBRFQ8IUR6 639 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 KRT78Q8N1N4 520 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 ZNF610Q8N9Z0 462 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 BRI3BPQ8WY22 251 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 MRPS27Q92552 414 aaKnown RBP5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 SYAP1Q96A49 352 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 KIAA1191Q96A73 305 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 ACAP3Q96P50 834 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 MTMR9Q96QG7 549 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 BOCQ9BWV1 1114 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 ZDHHC5Q9C0B5 715 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 PCIF1Q9H4Z3 704 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 SSU72Q9NP77 194 aaKnown RBP5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 RNF146Q9NTX7 359 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 GFOD1Q9NXC2 390 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 DACT1Q9NYF0 836 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 BTBD7Q9P203 1132 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 COL20A1Q9P218 1284 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 RBPJLQ9UBG7 517 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 MAGED2Q9UNF1 606 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 HPSEQ9Y251 543 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 SPO11Q9Y5K1 396 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 NPFFR2Q9Y5X5 522 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 GPR45Q9Y5Y3 372 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 DOCK3Q8IZD9 2030 aa5.7□□□□□ -1.5
HMGB1P4-201ENST00000455362 A0A0G2JMZ2 1700 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 VWA3AA6NCI4 1184 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 A6NCN8 305 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 RRN3P2A6NIE6 340 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 BTBD19C9JJ37 291 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 FAM47E-STBD1D6RA91 191 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 K7ENM7 598 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 M0R082 166 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 PDHXO00330 501 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 TMPRSS2O15393 492 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 SLC37A4O43826 429 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 MSCO60682 206 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 PEX10O60683 326 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 KINO60870 393 aaKnown RBP5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 CNMDO75829 334 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 ZNF202O95125 648 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 LETM1O95202 739 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 TBC1D8O95759 1140 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 ALBP02768 609 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 OR52Z1P0C646 297 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 PFKFB1P16118 471 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 AGXTP21549 392 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 LONP1P36776 959 aaKnown RBP5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 PIK3CBP42338 1070 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 TECP42680 631 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 SYKP43405 635 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 RPS6P62753 249 aaKnown RBP5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 CYP4F3Q08477 520 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 BAATQ14032 418 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 PDIA5Q14554 519 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 TAF12Q16514 161 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 CALCRLQ16602 461 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 ZSCAN23Q3MJ62 389 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 Q4G0T1 1027 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 SPECC1Q5M775 1068 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 IZUMO3Q5VZ72 239 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 RETSATQ6NUM9 610 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 NPNTQ6UXI9 565 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 C4orf50Q6ZRC1 276 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 RNF207Q6ZRF8 634 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 FRMD7Q6ZUT3 714 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 USP45Q70EL2 814 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 PDZD4Q76G19 769 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 C16orf59Q7L2K0 433 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 ANKRD23Q86SG2 305 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 RIOX2Q8IUF8 465 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 KIAA0319LQ8IZA0 1049 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 SDR16C5Q8N3Y7 309 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 CHST13Q8NET6 341 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 ZNF417Q8TAU3 575 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 CYP2W1Q8TAV3 490 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 FRS2Q8WU20 508 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 LRTOMTQ8WZ04 291 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 HAS1Q92839 578 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 TBC1D20Q96BZ9 403 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 EPSTI1Q96J88 318 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 TAAR1Q96RJ0 339 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 ZNF587Q96SQ5 575 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 PTPN18Q99952 460 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 COL25A1Q9BXS0 654 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 PANK2Q9BZ23 570 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 FOXQ1Q9C009 403 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 PRDM14Q9GZV8 571 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 SPATC1LQ9H0A9 340 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 UNC45AQ9H3U1 944 aa5.69□□□□□ -1.5
HMGB1P4-201ENST00000455362 CLSTN2Q9H4D0 955 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms