RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 TMEM132DQ14C87 1099 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 TRIP13Q15645 432 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-218ENST00000439806 CCL15Q16663 113 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 IZUMO3Q5VZ72 239 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 KAZNQ674X7 775 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 MTHFD1LQ6UB35 978 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 SPOCD1Q6ZMY3 1216 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 MICALCLQ6ZW33 695 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 APBB1IPQ7Z5R6 666 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-218ENST00000439806 NLRP14Q86W24 1093 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 TMEM192Q8IY95 271 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 LINC01465Q8N7H1 131 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 CCDC89Q8N998 374 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 OR6J1Q8NGC5 347 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 UHMK1Q8TAS1 419 aaKnown RBP11.03□□□□□ -0.64
CPNE1-218ENST00000439806 CCHCR1Q8TD31 782 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 NLRP7Q8WX94 980 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 PGM2Q96G03 612 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 CPB2Q96IY4 423 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 TMEM109Q9BVC6 243 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 TRAIPQ9BWF2 469 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 LHX5Q9H2C1 402 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 SEMA4AQ9H3S1 761 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 SYNCQ9H7C4 482 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 CYP3A43Q9HB55 503 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 WDR35Q9P2L0 1181 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 LRRD1A4D1F6 860 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 UNCXA6NJT0 531 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 NDC80O14777 642 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 RASGRF2O14827 1237 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 AGTP01019 485 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 RAD23BP54727 409 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 PTPN11Q06124 597 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 ZNF252P-AS1Q0IIN9 211 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 BYSLQ13895 437 aaKnown RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 GRIK4Q16099 956 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 HADHQ16836 314 aaKnown RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 WDR72Q3MJ13 1102 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 RHBDF2Q6PJF5 856 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 MFSD7Q6UXD7 560 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 ANKRD23Q86SG2 305 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 DPP9Q86TI2 863 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 PNMA8AQ86V59 439 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 SPATS2Q86XZ4 545 aaKnown RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 NIPA2Q8N8Q9 360 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 C1orf127Q8N9H9 656 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 IPO4Q8TEX9 1081 aaKnown RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 ZNF473Q8WTR7 871 aaKnown RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 EMID1Q96A84 441 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 ROPN1BQ9BZX4 212 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 SDCBP2Q9H190 292 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 CDC42EP4Q9H3Q1 356 aaKnown RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 SMYD3Q9H7B4 428 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 ROPN1Q9HAT0 212 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 IFT122Q9HBG6 1241 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 PPANQ9NQ55 473 aaKnown RBP11.02□□□□□ -0.65
CPNE1-218ENST00000439806 SLC12A6Q9UHW9 1150 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 SIX4Q9UIU6 781 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 TRIP11Q15643 1979 aa11.02□□□□□ -0.65
CPNE1-218ENST00000439806 ZNF236Q9UL36 1845 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 GMNCA6NCL1 334 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 GLTPD2A6NH11 291 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 SIGLEC16A6NMB1 481 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 BTBD19C9JJ37 291 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 F8VP50 259 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 H3BRB1 525 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 M0QYV0 167 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 MYO1CO00159 1063 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 LIASO43766 372 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 CSDE1O75534 798 aaKnown RBP11.01□□□□□ -0.65
CPNE1-218ENST00000439806 MICAL2O94851 1124 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 IQCF3P0C7M6 154 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 VDRP11473 427 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 KRT3P12035 628 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 KRT10P13645 584 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 ARF4P18085 180 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-218ENST00000439806 ATP5DP30049 168 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 PTPN7P35236 360 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 CHKAP35790 457 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 CDH8P55286 799 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 PSMC1P62191 440 aaKnown RBP11.01□□□□□ -0.65
CPNE1-218ENST00000439806 RBP5P82980 135 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 OGDHQ02218 1023 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 AMHR2Q16671 573 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 DCAF4L1Q3SXM0 396 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 PTPN20Q4JDL3 420 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 ATP13A4Q4VNC1 1196 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 PPP1R15BQ5SWA1 713 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 MAMDC4Q6UXC1 1216 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 NT5DC4Q86YG4 428 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 TTC39CQ8N584 583 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 WDTC1Q8N5D0 677 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 SLC4A11Q8NBS3 891 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 MYCBPAPQ8TBZ2 947 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 EPS8L3Q8TE67 593 aaKnown RBP11.01□□□□□ -0.65
CPNE1-218ENST00000439806 TMEM176AQ96HP8 235 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 ACAP3Q96P50 834 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 FAM118BQ9BPY3 351 aa11.01□□□□□ -0.65
CPNE1-218ENST00000439806 FOXP3Q9BZS1 431 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms