RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 C2orf15Q8WU43 125 aaKnown RBP10.17□□□□□ -0.78
NUP50-205ENST00000419387 CLDN23Q96B33 292 aa10.17□□□□□ -0.78
NUP50-205ENST00000419387 SEPT5Q99719 369 aaPredicted RBP10.17□□□□□ -0.78
NUP50-205ENST00000419387 CBWD1Q9BRT8 395 aa10.17□□□□□ -0.78
NUP50-205ENST00000419387 TNMDQ9H2S6 317 aa10.17□□□□□ -0.78
NUP50-205ENST00000419387 ATXN3LQ9H3M9 355 aa10.17□□□□□ -0.78
NUP50-205ENST00000419387 PCIF1Q9H4Z3 704 aa10.17□□□□□ -0.78
NUP50-205ENST00000419387 KBTBD4Q9NVX7 518 aa10.17□□□□□ -0.78
NUP50-205ENST00000419387 SPATA6Q9NWH7 488 aaPredicted RBP10.17□□□□□ -0.78
NUP50-205ENST00000419387 RBAKQ9NYW8 714 aaPredicted RBP10.17□□□□□ -0.78
NUP50-205ENST00000419387 R4GN57 208 aa10.17□□□□□ -0.78
NUP50-205ENST00000419387 USP34Q70CQ2 3546 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 SCN1AP35498 2009 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 COL4A3Q01955 1670 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 DMDP11532 3685 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 KIAA0391O15091 583 aaKnown RBP10.16□□□□□ -0.78
NUP50-205ENST00000419387 HUS1O60921 280 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 LMNAP02545 664 aaKnown RBP10.16□□□□□ -0.78
NUP50-205ENST00000419387 ITGB3P05106 788 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 HAPLN1P10915 354 aaPredicted RBP10.16□□□□□ -0.78
NUP50-205ENST00000419387 GABRR2P28476 465 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 POLR2BP30876 1174 aaKnown RBP10.16□□□□□ -0.78
NUP50-205ENST00000419387 RPS9P46781 194 aaKnown RBP10.16□□□□□ -0.78
NUP50-205ENST00000419387 CDR1P51861 262 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 VEPH1Q14D04 833 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 TAF12Q16514 161 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 ZNF528Q3MIS6 628 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 MGAT5BQ3V5L5 792 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 ARHGAP15Q53QZ3 475 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 FOXD4L5Q5VV16 416 aaPredicted RBP10.16□□□□□ -0.78
NUP50-205ENST00000419387 ZC3H14Q6PJT7 736 aaKnown RBP10.16□□□□□ -0.78
NUP50-205ENST00000419387 SHC4Q6S5L8 630 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 ARID3BQ8IVW6 561 aaPredicted RBP10.16□□□□□ -0.78
NUP50-205ENST00000419387 YAF2Q8IY57 180 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 GPD1LQ8N335 351 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 CSGALNACT2Q8N6G5 542 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 IQUBQ8NA54 791 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 CXorf38Q8TB03 319 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 KCNG4Q8TDN1 519 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 NOC3LQ8WTT2 800 aaKnown RBP10.16□□□□□ -0.78
NUP50-205ENST00000419387 FOXD4L4Q8WXT5 416 aaPredicted RBP10.16□□□□□ -0.78
NUP50-205ENST00000419387 DHX58Q96C10 678 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 LPIN3Q9BQK8 851 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 TRIM9Q9C026 710 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 PDE11AQ9HCR9 933 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 FBXO4Q9UKT5 387 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 ITGA11Q9UKX5 1188 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 ANK1P16157 1881 aa10.16□□□□□ -0.78
NUP50-205ENST00000419387 MYO15AQ9UKN7 3530 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 NCANO14594 1321 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 PTPRZ1P23471 2315 aaPredicted RBP10.15□□□□□ -0.78
NUP50-205ENST00000419387 ZNF233A6NK53 670 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 DPYSL4O14531 572 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 CHADO15335 359 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 HSP90AA1P07900 732 aaKnown RBP10.15□□□□□ -0.78
NUP50-205ENST00000419387 KRT19P08727 400 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 TMEM191BP0C7N4 346 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 ZSCAN22P10073 491 aaPredicted RBP10.15□□□□□ -0.78
NUP50-205ENST00000419387 ATF6P18850 670 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 WEE1P30291 646 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 CDC25CP30307 473 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 MLLT6P55198 1093 aaPredicted RBP10.15□□□□□ -0.78
NUP50-205ENST00000419387 ASIC1P78348 528 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 RBP5P82980 135 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 TSPY1Q01534 308 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 CSTF1Q05048 431 aaKnown RBP10.15□□□□□ -0.78
NUP50-205ENST00000419387 FCHO2Q0JRZ9 810 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 BFSP1Q12934 665 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 PKP1Q13835 747 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 SURF1Q15526 300 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 STXBP5Q5T5C0 1151 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 GPR158Q5T848 1215 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 SCARA3Q6AZY7 606 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 CNNM4Q6P4Q7 775 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 GPIHBP1Q8IV16 184 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 HSCBQ8IWL3 235 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 ZNF687Q8N1G0 1237 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 TMEM86AQ8N2M4 240 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 PDCL2Q8N4E4 241 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 LRRC52Q8N7C0 313 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 GLIS3Q8NEA6 775 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 ZNF507Q8TCN5 953 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 GIPC2Q8TF65 315 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 FAM3CQ92520 227 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 HPS3Q969F9 1004 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 RSPRY1Q96DX4 576 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 ANKRD36BP1Q96IX9 119 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 C7orf25Q9BPX7 421 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 ACBD6Q9BR61 282 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 MKNK1Q9BUB5 465 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 TASP1Q9H6P5 420 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 TMLHEQ9NVH6 421 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 GDAP2Q9NXN4 497 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 OBP2AQ9NY56 170 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 ABI2Q9NYB9 513 aaPredicted RBP10.15□□□□□ -0.78
NUP50-205ENST00000419387 NDRG2Q9UN36 371 aaKnown RBP10.15□□□□□ -0.78
NUP50-205ENST00000419387 L1RE1Q9UN81 338 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 PCDHB5Q9Y5E4 795 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 PIAS3Q9Y6X2 628 aa10.15□□□□□ -0.78
NUP50-205ENST00000419387 CACNA1IQ9P0X4 2223 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms