RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 FSCBQ5H9T9 825 aa17.58■□□□□ 0.41
PCDHA13-202ENST00000409494 MAP4K3Q8IVH8 894 aa17.58■□□□□ 0.41
PCDHA13-202ENST00000409494 ADGRF2Q8IZF7 708 aa17.58■□□□□ 0.41
PCDHA13-202ENST00000409494 OR6P1Q8NGX9 317 aa17.58■□□□□ 0.41
PCDHA13-202ENST00000409494 ALKBH8Q96BT7 664 aaKnown RBP17.58■□□□□ 0.41
PCDHA13-202ENST00000409494 WNK4Q96J92 1243 aa17.58■□□□□ 0.41
PCDHA13-202ENST00000409494 VCPIP1Q96JH7 1222 aa17.58■□□□□ 0.41
PCDHA13-202ENST00000409494 SERPINI1Q99574 410 aa17.58■□□□□ 0.41
PCDHA13-202ENST00000409494 TMEM117Q9H0C3 514 aa17.58■□□□□ 0.41
PCDHA13-202ENST00000409494 ZWINTO95229 277 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 PLA2G4AP47712 749 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 SLC7A14Q8TBB6 771 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 UCMAQ8WVF2 138 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 PNMA5Q96PV4 448 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 TRIM55Q9BYV6 548 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 FAM237AA0A1B0GTK4 181 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 CHUKO15111 745 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 VTNP04004 478 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 RAG1P15918 1043 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 MCL1Q07820 350 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 SDE2Q6IQ49 451 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 DNAJC17Q9NVM6 304 aaKnown RBP17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 INTS13Q9NVM9 706 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 VPS9D1Q9Y2B5 631 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 LGALS2P05162 132 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 ZNF135P52742 658 aaPredicted RBP17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 FAM110CQ1W6H9 321 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 LINC00523Q86TU6 105 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 CHSY1Q86X52 802 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 DCUN1D1Q96GG9 259 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 MTMR12Q9C0I1 747 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 TRPM5Q9NZQ8 1165 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 FBXL5Q9UKA1 691 aa17.58■□□□□ 0.4
PCDHA13-202ENST00000409494 DCTN3O75935 186 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 CD44P16070 742 aaKnown RBP17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 PPM1NQ8N819 430 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 GBP5Q96PP8 586 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 YME1L1Q96TA2 773 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 SYT17Q9BSW7 474 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 SEMA6BQ9H3T3 888 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 MRPL40Q9NQ50 206 aaKnown RBP17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 CASQ2O14958 399 aaPredicted RBP17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 CLGNO14967 610 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 KCNN4O15554 427 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 PSMD10O75832 226 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 BYSLQ13895 437 aaKnown RBP17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 RABGAP1LQ5R372 815 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 PORCNQ9H237 461 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 TRIM17Q9Y577 477 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 NCAM1P13591 858 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 AMPD2Q01433 879 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 CNTN2Q02246 1040 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 TBC1D1Q86TI0 1168 aaPredicted RBP17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 ZC3H18Q86VM9 953 aaKnown RBP17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 OSMRQ99650 979 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 FUT8Q9BYC5 575 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 ZFATQ9P243 1243 aa17.57■□□□□ 0.4
PCDHA13-202ENST00000409494 FKTNO75072 461 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 PPP1R37O75864 691 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 ANXA9O76027 345 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 BAG2O95816 211 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 UBA1P22314 1058 aaKnown RBP17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 FNTAP49354 379 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 TRADDQ15628 312 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 CTXN3Q4LDR2 81 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 C10orf120Q5SQS8 335 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 NAPEPLDQ6IQ20 393 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 SV2AQ7L0J3 742 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 CCNJLQ8IV13 435 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 RAPGEF5Q92565 580 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 TMEM176AQ96HP8 235 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 AMACRQ9UHK6 382 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 TTC7AQ9ULT0 858 aaPredicted RBP17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 NALCNQ8IZF0 1738 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 CFAP99D6REC4 459 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 COMTP21964 271 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 C1orf54Q8WWF1 131 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 MS4A14Q96JA4 679 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 FBXO44Q9H4M3 255 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 PRDM16Q9HAZ2 1276 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 TPX2Q9ULW0 747 aaKnown RBP17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 AMHP03971 560 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 PAEPP09466 180 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 PRLRP16471 622 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 SARSP49591 514 aaKnown RBP17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 ZNF280AP59817 542 aaPredicted RBP17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 TMEM86AQ8N2M4 240 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 CYFIP2Q96F07 1278 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 SEZ6LQ9BYH1 1024 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 BARX2Q9UMQ3 279 aaPredicted RBP17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 ATP5HO75947 161 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 LYPLA2O95372 231 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 TMPRSS15P98073 1019 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 PTPN11Q06124 597 aaPredicted RBP17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 GTF2H3Q13889 308 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 GRIK5Q16478 980 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 BEND6Q5SZJ8 279 aaPredicted RBP17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 ACAD11Q709F0 780 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 EPM2AIP1Q7L775 607 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms