RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 KAZNQ674X7 775 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 DNAJC24Q6P3W2 148 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 EPS8L3Q8TE67 593 aaKnown RBP16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 SLCO2A1Q92959 643 aa16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 JPH2Q9BR39 696 aaPredicted RBP16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.07■□□□□ 0.16
SCAMP4-202ENST00000409472 GLTPD2A6NH11 291 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 NUDT17P0C025 328 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 SMPD1P17405 629 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 MDH1P40925 334 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 PHKA2P46019 1235 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 TMEM62Q0P6H9 643 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 LAMC2Q13753 1193 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 SLC10A6Q3KNW5 377 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 EMC10Q5UCC4 262 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 MFSD7Q6UXD7 560 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 PPTC7Q8NI37 304 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 JOSD2Q8TAC2 188 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 MIEF2Q96C03 454 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 PRMT7Q9NVM4 692 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 PNMA3Q9UL41 463 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 BRCA2P51587 3418 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 SLCO1A2P46721 670 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 RAD23BP54727 409 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 MARCH8Q5T0T0 291 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 DENND2CQ68D51 928 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 RHBDF2Q6PJF5 856 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 KIAA0319LQ8IZA0 1049 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 TMEM35BQ8NCS4 154 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 HAUS1Q96CS2 278 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 PLVAPQ9BX97 442 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 ELOVL4Q9GZR5 314 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 RNF19AQ9NV58 838 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 NEU2Q9Y3R4 380 aa16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 ATXN2Q99700 1313 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-202ENST00000409472 TLDC2A0PJX2 215 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 RIPK2O43353 540 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 LSM8O95777 96 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 ATF7P17544 494 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 LACTBP83111 547 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 PTK6Q13882 451 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 SURF1Q15526 300 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 ZNF484Q5JVG2 852 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 MTHFD1LQ6UB35 978 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 EXOC8Q8IYI6 725 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 RAPGEF5Q92565 580 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 LENG1Q96BZ8 264 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 SLITRK1Q96PX8 696 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 CPXM1Q96SM3 734 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 BCO2Q9BYV7 579 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 CITO14578 2027 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 SCN4AP35499 1836 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 TSPAN1O60635 241 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 KRT1P04264 644 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 POLR2BP30876 1174 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 CDH5P33151 784 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 RFC1P35251 1148 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 ITGA8P53708 1063 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 NFX1Q12986 1120 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 PTGISQ16647 500 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 ZNF667Q5HYK9 610 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 DCUN1D2Q6PH85 259 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 RUFY4Q6ZNE9 571 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 GPR142Q7Z601 462 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 ERICH1Q86X53 443 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 ARFGAP1Q8N6T3 406 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 EMC1Q8N766 993 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 SLC4A11Q8NBS3 891 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 MDM1Q8TC05 714 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 NLRP7Q8WX94 980 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 NFKBIZQ9BYH8 718 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 CDC42EP4Q9H3Q1 356 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 MTRF1LQ9UGC7 380 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 IP6K2Q9UHH9 426 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 PCDHGC3Q9UN70 934 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 DOCK3Q8IZD9 2030 aa16.05■□□□□ 0.16
SCAMP4-202ENST00000409472 H3BRB1 525 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 ACSL3O95573 720 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 CALB1P05937 261 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 MAN1A1P33908 653 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 IFI35P80217 286 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 SMTNL2Q2TAL5 461 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 ZFYVE27Q5T4F4 411 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 AGBL2Q5U5Z8 902 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 EXD1Q8NHP7 514 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 TLCD1Q96CP7 247 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 PTPN18Q99952 460 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 TUT1Q9H6E5 874 aaKnown RBP16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 GINS2Q9Y248 185 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 CHUKO15111 745 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 ERBB2P04626 1255 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 CALCOCO2Q13137 446 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 GRIK4Q16099 956 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 FAM187BQ17R55 369 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 ODF2Q5BJF6 829 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 DPH6Q7L8W6 267 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 SGSM3Q96HU1 749 aa16.04■□□□□ 0.16
SCAMP4-202ENST00000409472 SCLT1Q96NL6 688 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms