RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 TWF1Q12792 350 aa22.3■■□□□ 1.16
PDGFA-204ENST00000405692 FILIP1Q7Z7B0 1213 aa22.3■■□□□ 1.16
PDGFA-204ENST00000405692 RNF135Q8IUD6 432 aa22.3■■□□□ 1.16
PDGFA-204ENST00000405692 EEF2KMTQ96G04 330 aa22.3■■□□□ 1.16
PDGFA-204ENST00000405692 XYLT2Q9H1B5 865 aa22.3■■□□□ 1.16
PDGFA-204ENST00000405692 SNX25Q9H3E2 840 aa22.3■■□□□ 1.16
PDGFA-204ENST00000405692 TMEM8AQ9HCN3 771 aa22.3■■□□□ 1.16
PDGFA-204ENST00000405692 NXF1Q9UBU9 619 aaKnown RBP22.3■■□□□ 1.16
PDGFA-204ENST00000405692 ARMCX3Q9UH62 379 aaPredicted RBP22.3■■□□□ 1.16
PDGFA-204ENST00000405692 YIPF1Q9Y548 306 aa22.3■■□□□ 1.16
PDGFA-204ENST00000405692 ZFP37Q9Y6Q3 630 aaPredicted RBP22.3■■□□□ 1.16
PDGFA-204ENST00000405692 TRIM49P0CI25 452 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 TRIM49CP0CI26 452 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 GCLMP48507 274 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 EPHB3P54753 998 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 MAPRE1Q15691 268 aaKnown RBP22.29■■□□□ 1.16
PDGFA-204ENST00000405692 PABPC1LQ4VXU2 614 aaKnown RBP22.29■■□□□ 1.16
PDGFA-204ENST00000405692 INTS6LQ5JSJ4 861 aaKnown RBP22.29■■□□□ 1.16
PDGFA-204ENST00000405692 C1orf220Q5T0J3 134 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 KRT39Q6A163 491 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 ATAD1Q8NBU5 361 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 LEMD2Q8NC56 503 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 FEZF2Q8TBJ5 459 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 AVENQ9NQS1 362 aaPredicted RBP22.29■■□□□ 1.16
PDGFA-204ENST00000405692 DNMT3BQ9UBC3 853 aaKnown RBP22.29■■□□□ 1.16
PDGFA-204ENST00000405692 CDH9Q9ULB4 789 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 CTNND2Q9UQB3 1225 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 ASB3Q9Y575 518 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 PCDHB5Q9Y5E4 795 aa22.29■■□□□ 1.16
PDGFA-204ENST00000405692 ZNF197O14709 1029 aa22.28■■□□□ 1.16
PDGFA-204ENST00000405692 VNN1O95497 513 aa22.28■■□□□ 1.16
PDGFA-204ENST00000405692 GNL1P36915 607 aaPredicted RBP22.28■■□□□ 1.16
PDGFA-204ENST00000405692 CYP4A22Q5TCH4 519 aa22.28■■□□□ 1.16
PDGFA-204ENST00000405692 TCERG1LQ5VWI1 586 aa22.28■■□□□ 1.16
PDGFA-204ENST00000405692 TTI2Q6NXR4 508 aa22.28■■□□□ 1.16
PDGFA-204ENST00000405692 GET4Q7L5D6 327 aaPredicted RBP22.28■■□□□ 1.16
PDGFA-204ENST00000405692 MLKLQ8NB16 471 aa22.28■■□□□ 1.16
PDGFA-204ENST00000405692 KBTBD7Q8WVZ9 684 aa22.28■■□□□ 1.16
PDGFA-204ENST00000405692 A0A0C4DFX4 3053 aa22.28■■□□□ 1.16
PDGFA-204ENST00000405692 DCXO43602 365 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 VNN2O95498 520 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 GNA14O95837 355 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 HLA-DRAP01903 254 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 RHOP08100 348 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 PPP3CAQ08209 521 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 VEPH1Q14D04 833 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 MGAT5BQ3V5L5 792 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 CCDC40Q4G0X9 1142 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 C4orf50Q6ZRC1 276 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 FRMD5Q7Z6J6 570 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 ITIH5Q86UX2 942 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 LRRTM3Q86VH5 581 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 OSTM1Q86WC4 334 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 OR6B3Q8NGW1 331 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 SEPT5Q99719 369 aaPredicted RBP22.27■■□□□ 1.16
PDGFA-204ENST00000405692 SYT15Q9BQS2 421 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 CORO1BQ9BR76 489 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 MMRN2Q9H8L6 949 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 ABCB6Q9NP58 842 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 ABI2Q9NYB9 513 aaPredicted RBP22.27■■□□□ 1.16
PDGFA-204ENST00000405692 DACH1Q9UI36 760 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 SLC27A5Q9Y2P5 690 aa22.27■■□□□ 1.16
PDGFA-204ENST00000405692 PI4K2BG5E9Z4 385 aa22.26■■□□□ 1.15
PDGFA-204ENST00000405692 MBD3O95983 291 aa22.26■■□□□ 1.15
PDGFA-204ENST00000405692 ASS1P00966 412 aaKnown RBP22.26■■□□□ 1.15
PDGFA-204ENST00000405692 ACAT1P24752 427 aaKnown RBP22.26■■□□□ 1.15
PDGFA-204ENST00000405692 MXI1P50539 228 aa22.26■■□□□ 1.15
PDGFA-204ENST00000405692 DCAF17Q5H9S7 520 aaPredicted RBP22.26■■□□□ 1.15
PDGFA-204ENST00000405692 PDZD4Q76G19 769 aaPredicted RBP22.26■■□□□ 1.15
PDGFA-204ENST00000405692 SPATA2LQ8IUW3 424 aaPredicted RBP22.26■■□□□ 1.15
PDGFA-204ENST00000405692 FUBP3Q96I24 572 aaKnown RBP eCLIP22.26■■□□□ 1.15
PDGFA-204ENST00000405692 DUSP9Q99956 384 aaKnown RBP22.26■■□□□ 1.15
PDGFA-204ENST00000405692 MRPL45Q9BRJ2 306 aaKnown RBP22.26■■□□□ 1.15
PDGFA-204ENST00000405692 ASAH2Q9NR71 780 aa22.26■■□□□ 1.15
PDGFA-204ENST00000405692 HCFC1R1Q9NWW0 138 aa22.26■■□□□ 1.15
PDGFA-204ENST00000405692 EPS15L1Q9UBC2 864 aa22.26■■□□□ 1.15
PDGFA-204ENST00000405692 RWDD2AQ9UIY3 292 aa22.26■■□□□ 1.15
PDGFA-204ENST00000405692 GTF3C4Q9UKN8 822 aa22.26■■□□□ 1.15
PDGFA-204ENST00000405692 MRPS23Q9Y3D9 190 aaKnown RBP22.26■■□□□ 1.15
PDGFA-204ENST00000405692 C2orf16Q68DN1 1984 aa22.26■■□□□ 1.15
PDGFA-204ENST00000405692 DENND4AQ7Z401 1863 aa22.26■■□□□ 1.15
PDGFA-204ENST00000405692 HAPLN1P10915 354 aaPredicted RBP22.25■■□□□ 1.15
PDGFA-204ENST00000405692 TRIM21P19474 475 aaKnown RBP22.25■■□□□ 1.15
PDGFA-204ENST00000405692 STX17P56962 302 aa22.25■■□□□ 1.15
PDGFA-204ENST00000405692 NTHL1P78549 312 aa22.25■■□□□ 1.15
PDGFA-204ENST00000405692 TAF12Q16514 161 aa22.25■■□□□ 1.15
PDGFA-204ENST00000405692 FBXL13Q8NEE6 735 aa22.25■■□□□ 1.15
PDGFA-204ENST00000405692 FAM200AQ8TCP9 573 aa22.25■■□□□ 1.15
PDGFA-204ENST00000405692 NXPE3Q969Y0 559 aa22.25■■□□□ 1.15
PDGFA-204ENST00000405692 DNAI2Q9GZS0 605 aa22.25■■□□□ 1.15
PDGFA-204ENST00000405692 CRISPLD1Q9H336 500 aa22.25■■□□□ 1.15
PDGFA-204ENST00000405692 CEP72Q9P209 647 aa22.25■■□□□ 1.15
PDGFA-204ENST00000405692 IGSF9Q9P2J2 1179 aa22.25■■□□□ 1.15
PDGFA-204ENST00000405692 LIMD1Q9UGP4 676 aa22.25■■□□□ 1.15
PDGFA-204ENST00000405692 CDH7Q9ULB5 785 aa22.25■■□□□ 1.15
PDGFA-204ENST00000405692 TTC28Q96AY4 2481 aa22.24■■□□□ 1.15
PDGFA-204ENST00000405692 A8MXQ7 604 aa22.24■■□□□ 1.15
PDGFA-204ENST00000405692 MICAL2O94851 1124 aa22.24■■□□□ 1.15
PDGFA-204ENST00000405692 FGF19O95750 216 aa22.24■■□□□ 1.15
PDGFA-204ENST00000405692 PDGFRBP09619 1106 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms