RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 FSTL1Q12841 308 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 PDIA2Q13087 525 aaKnown RBP14.77□□□□□ -0.04
SCAF4-202ENST00000399804 P3H1Q32P28 736 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 SLC27A1Q6PCB7 646 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 ZBED8Q8IZ13 594 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 CFAP36Q96G28 342 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 CYP3A43Q9HB55 503 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 TNRC6CQ9HCJ0 1690 aaKnown RBP14.77□□□□□ -0.04
SCAF4-202ENST00000399804 EDIL3O43854 480 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 B3GAT3O94766 335 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 ITIH2P19823 946 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 GPD1P21695 349 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 ARL2P36404 184 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 NDST1P52848 882 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 MTM1Q13496 603 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 FSCN1Q16658 493 aaKnown RBP14.77□□□□□ -0.04
SCAF4-202ENST00000399804 SYCP2LQ5T4T6 812 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 SIK2Q9H0K1 926 aa14.77□□□□□ -0.04
SCAF4-202ENST00000399804 CNOT10Q9H9A5 744 aaKnown RBP14.77□□□□□ -0.04
SCAF4-202ENST00000399804 NAV1Q8NEY1 1877 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 RASSF10A6NK89 507 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 NFICP08651 508 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 AKR1A1P14550 325 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 ATICP31939 592 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 ARL1P40616 181 aaPredicted RBP14.77□□□□□ -0.05
SCAF4-202ENST00000399804 MAP3K10Q02779 954 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 CDKL2Q92772 493 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 TRAIPQ9BWF2 469 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 SLX4Q8IY92 1834 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 CSPG5O95196 566 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 LSM8O95777 96 aaKnown RBP14.77□□□□□ -0.05
SCAF4-202ENST00000399804 RBP3P10745 1247 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 PNPLA4P41247 253 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 PDE1BQ01064 536 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 MAP2K5Q13163 448 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 ZNF410Q86VK4 478 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 SRRM1Q8IYB3 904 aaKnown RBP14.77□□□□□ -0.05
SCAF4-202ENST00000399804 URGCPQ8TCY9 931 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 KIAA1257Q9ULG3 409 aa14.77□□□□□ -0.05
SCAF4-202ENST00000399804 RBAK-RBAKDNI3L0D1 243 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 SAT1P21673 171 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 CA4P22748 312 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 EIF4BP23588 611 aaKnown RBP14.76□□□□□ -0.05
SCAF4-202ENST00000399804 FAM110CQ1W6H9 321 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 PAN2Q504Q3 1202 aaKnown RBP14.76□□□□□ -0.05
SCAF4-202ENST00000399804 PALB2Q86YC2 1186 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 FBXO25Q8TCJ0 367 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 MT-ND3P03897 115 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 IL9RQ01113 521 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 IFT88Q13099 833 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 CCDC38Q502W7 563 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 DCAF6Q58WW2 860 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 EFHC2Q5JST6 749 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 PCGF5Q86SE9 256 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 SPATA18Q8TC71 538 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 FBF1Q8TES7 1133 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 PGBD4Q96DM1 585 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 KCNH4Q9UQ05 1017 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 DUSP28Q4G0W2 176 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 CFAP157Q5JU67 520 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 FBXO47Q5MNV8 452 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 HEATR6Q6AI08 1181 aaKnown RBP14.76□□□□□ -0.05
SCAF4-202ENST00000399804 MTHFD1LQ6UB35 978 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 CXCL17Q6UXB2 119 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 RNF180Q86T96 592 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 GDAP1Q8TB36 358 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 RBM15Q96T37 977 aaKnown RBP eCLIP14.76□□□□□ -0.053e-12■■■■□ 25
SCAF4-202ENST00000399804 MAF1Q9H063 256 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 MLXIPLQ9NP71 852 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 KLHL8Q9P2G9 620 aaPredicted RBP14.76□□□□□ -0.05
SCAF4-202ENST00000399804 ITGA11Q9UKX5 1188 aa14.76□□□□□ -0.05
SCAF4-202ENST00000399804 BARX2Q9UMQ3 279 aaPredicted RBP14.76□□□□□ -0.05
SCAF4-202ENST00000399804 RASA4BC9J798 803 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 I3L4J1 428 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 RASA4O43374 803 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 PSTPIP1O43586 416 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 FNTAP49354 379 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 KYNUQ16719 465 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 SPRYD7Q5W111 196 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 AADACL2Q6P093 401 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 SYDE1Q6ZW31 735 aaPredicted RBP14.75□□□□□ -0.05
SCAF4-202ENST00000399804 LRRC8CQ8TDW0 803 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.75□□□□□ -0.05
SCAF4-202ENST00000399804 KLHL14Q9P2G3 628 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 SLC12A6Q9UHW9 1150 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 APOL1O14791 398 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 PRPSAP1Q14558 356 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 RGMBQ6NW40 437 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 GLB1LQ6UWU2 654 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 SOCS4Q8WXH5 440 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 ARHGEF2Q92974 986 aaKnown RBP14.75□□□□□ -0.05
SCAF4-202ENST00000399804 PCDHB18PQ96TA0 734 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 NRCAMQ92823 1304 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 COL2A1P02458 1487 aaPredicted RBP14.75□□□□□ -0.05
SCAF4-202ENST00000399804 ARIH2O95376 493 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 ARF4P18085 180 aaPredicted RBP14.75□□□□□ -0.05
SCAF4-202ENST00000399804 ITGA8P53708 1063 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 PPTC7Q8NI37 304 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 VCPIP1Q96JH7 1222 aa14.75□□□□□ -0.05
SCAF4-202ENST00000399804 SIX2Q9NPC8 291 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms