RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ABI2Q9NYB9 513 aaPredicted RBP14.78□□□□□ -0.04
CXCL12-205ENST00000395794 PCDHB5Q9Y5E4 795 aa14.78□□□□□ -0.04
CXCL12-205ENST00000395794 MUC6Q6W4X9 2439 aa14.77□□□□□ -0.04
CXCL12-205ENST00000395794 A0A1W2PRU2 124 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 CLIC2O15247 247 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 TGFB1I1O43294 461 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 ACTN4O43707 911 aaKnown RBP14.77□□□□□ -0.05
CXCL12-205ENST00000395794 EXOC3O60645 756 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 SOAT2O75908 522 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 GJA1P17302 382 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 PCSK1P29120 753 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 SYKP43405 635 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 LHX1P48742 406 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 STARD6P59095 220 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 EHHADHQ08426 723 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 TEAD2Q15562 447 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 MLF2Q15773 248 aaPredicted RBP14.77□□□□□ -0.05
CXCL12-205ENST00000395794 KNOP1Q1ED39 458 aaKnown RBP14.77□□□□□ -0.05
CXCL12-205ENST00000395794 BMT2Q1RMZ1 405 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 LMBRD2Q68DH5 695 aaPredicted RBP14.77□□□□□ -0.05
CXCL12-205ENST00000395794 YAF2Q8IY57 180 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 TTC9BQ8N6N2 239 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 TOP6BLQ8N6T0 577 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 SHKBP1Q8TBC3 707 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 SPATA18Q8TC71 538 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 CCDC127Q96BQ5 260 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 CCDC34Q96HJ3 373 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 HPDLQ96IR7 371 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 ACBD6Q9BR61 282 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 DNAJC25Q9H1X3 360 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 ATXN3LQ9H3M9 355 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 BRD9Q9H8M2 597 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 DDX43Q9NXZ2 648 aaKnown RBP14.77□□□□□ -0.05
CXCL12-205ENST00000395794 L1RE1Q9UN81 338 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 ZNF318Q5VUA4 2279 aa14.77□□□□□ -0.05
CXCL12-205ENST00000395794 KMT2EQ8IZD2 1858 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 WDFY4Q6ZS81 3184 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 KIF20AO95235 890 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 HAPLN1P10915 354 aaPredicted RBP14.76□□□□□ -0.05
CXCL12-205ENST00000395794 PSMC3P17980 439 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 CDR1P51861 262 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 PSMD6Q15008 389 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 DPH6Q7L8W6 267 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 LRRTM3Q86VH5 581 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 ADGRF2Q8IZF7 708 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 OR5B17Q8NGF7 314 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 DEPDC1BQ8WUY9 529 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 IRF7Q92985 503 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 ZSWIM3Q96MP5 696 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 PLA2G2FQ9BZM2 168 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 FAM86C1Q9NVL1 165 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 SIX4Q9UIU6 781 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 ZDHHC9Q9Y397 364 aa14.76□□□□□ -0.05
CXCL12-205ENST00000395794 FARP1Q9Y4F1 1045 aaPredicted RBP14.76□□□□□ -0.05
CXCL12-205ENST00000395794 ZDBF2Q9HCK1 2354 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 KANSL1LA0AUZ9 987 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 DPYSL4O14531 572 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 PHACTR2O75167 634 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 MOSPD3O75425 235 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 CLSTN1O94985 981 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 FCARP24071 287 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 GABRR2P28476 465 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 CDC25CP30307 473 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 RPL10AP62906 217 aaKnown RBP14.75□□□□□ -0.05
CXCL12-205ENST00000395794 CYP24A1Q07973 514 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 TRPC3Q13507 836 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 GRM2Q14416 872 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 UBXN2BQ14CS0 331 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 KMT5BQ4FZB7 885 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 INTS6LQ5JSJ4 861 aaKnown RBP14.75□□□□□ -0.05
CXCL12-205ENST00000395794 TRAPPC11Q7Z392 1133 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 TMC8Q8IU68 726 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 SPATA2LQ8IUW3 424 aaPredicted RBP14.75□□□□□ -0.05
CXCL12-205ENST00000395794 C12orf56Q8IXR9 622 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 PJA1Q8NG27 643 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 CXorf38Q8TB03 319 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 GIPC2Q8TF65 315 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 DNASE1L2Q92874 299 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 FAM84AQ96KN4 292 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 MMS19Q96T76 1030 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 NELL2Q99435 816 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 CGRRF1Q99675 332 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 LPIN3Q9BQK8 851 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 PI4K2AQ9BTU6 479 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 LRRC3Q9BY71 257 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 BCO2Q9BYV7 579 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 TRPV4Q9HBA0 871 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 MRPS17Q9Y2R5 130 aaKnown RBP14.75□□□□□ -0.05
CXCL12-205ENST00000395794 DOCK8Q8NF50 2099 aa14.75□□□□□ -0.05
CXCL12-205ENST00000395794 PTPRJQ12913 1337 aa14.74□□□□□ -0.05
CXCL12-205ENST00000395794 A0A1W2PQ27 194 aa14.74□□□□□ -0.05
CXCL12-205ENST00000395794 A0A1W2PQ64 194 aa14.74□□□□□ -0.05
CXCL12-205ENST00000395794 A0A1W2PQD8 194 aa14.74□□□□□ -0.05
CXCL12-205ENST00000395794 FAM170BA6NMN3 283 aa14.74□□□□□ -0.05
CXCL12-205ENST00000395794 ZNF263O14978 683 aa14.74□□□□□ -0.05
CXCL12-205ENST00000395794 NCAM2O15394 837 aa14.74□□□□□ -0.05
CXCL12-205ENST00000395794 DCNP07585 359 aaKnown RBP14.74□□□□□ -0.05
CXCL12-205ENST00000395794 ACAT1P24752 427 aaKnown RBP14.74□□□□□ -0.05
CXCL12-205ENST00000395794 GDI1P31150 447 aa14.74□□□□□ -0.05
CXCL12-205ENST00000395794 VIPR2P41587 438 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms